BLASTX nr result

ID: Coptis23_contig00038770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038770
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003572173.1| PREDICTED: ABC transporter A family member 7...    88   6e-30
ref|XP_003523037.1| PREDICTED: ABC transporter A family member 7...    86   6e-29
gb|AFW62123.1| hypothetical protein ZEAMMB73_955959 [Zea mays]         89   1e-28
ref|XP_003609037.1| ABC transporter A family member [Medicago tr...    80   2e-28
ref|XP_003576447.1| PREDICTED: ABC transporter A family member 7...    90   6e-28

>ref|XP_003572173.1| PREDICTED: ABC transporter A family member 7-like [Brachypodium
           distachyon]
          Length = 954

 Score = 87.8 bits (216), Expect(2) = 6e-30
 Identities = 40/89 (44%), Positives = 58/89 (65%)
 Frame = +3

Query: 207 FSLLDVITVMAYIYTFGSGLLGKFLFQDFLEDDSFPRSLVIVMEIFPSISLYRGLYDLQQ 386
           FS + + TV+ YIY FGSGLLG+FL + F+ED+ FP+  ++VME+ P  SL+RGLY+L Q
Sbjct: 458 FSSVKIATVVGYIYVFGSGLLGEFLLRFFVEDNGFPKGWIVVMELIPGFSLFRGLYELGQ 517

Query: 387 XXXXXXXXXXXXXXWIDMNDRLNGMKEVL 473
                         W +++D +NGM+ VL
Sbjct: 518 YSFSGNAMGTNGMKWSNLSDPVNGMRTVL 546



 Score = 68.2 bits (165), Expect(2) = 6e-30
 Identities = 33/46 (71%), Positives = 37/46 (80%)
 Frame = +2

Query: 2   GSITGLKIFTMNDYSIQFLFYFVYINLQIATAFLWATIFSSGKIAT 139
           GS+ GL+ FT NDYSIQF FYF+YINLQIA AF  A+ FSS KIAT
Sbjct: 420 GSLIGLRFFTNNDYSIQFAFYFIYINLQIALAFFAASFFSSVKIAT 465


>ref|XP_003523037.1| PREDICTED: ABC transporter A family member 7-like [Glycine max]
          Length = 949

 Score = 85.9 bits (211), Expect(2) = 6e-29
 Identities = 42/89 (47%), Positives = 54/89 (60%)
 Frame = +3

Query: 207 FSLLDVITVMAYIYTFGSGLLGKFLFQDFLEDDSFPRSLVIVMEIFPSISLYRGLYDLQQ 386
           FS +   TV+AYI  FG+GLL  F F  F++D SFPR  +IVME++P  +LYRGLY+  Q
Sbjct: 455 FSNVKTATVLAYIGMFGTGLLADFPFHFFVQDTSFPRGWIIVMELYPGFALYRGLYEFSQ 514

Query: 387 XXXXXXXXXXXXXXWIDMNDRLNGMKEVL 473
                         W D++D  NGMKEVL
Sbjct: 515 YAFSGDALGTDGMRWSDLSDSTNGMKEVL 543



 Score = 66.6 bits (161), Expect(2) = 6e-29
 Identities = 31/46 (67%), Positives = 38/46 (82%)
 Frame = +2

Query: 2   GSITGLKIFTMNDYSIQFLFYFVYINLQIATAFLWATIFSSGKIAT 139
           GS+ GL  FTMNDYSIQ +FYF+YINLQI+ AFL A++FS+ K AT
Sbjct: 417 GSVIGLNFFTMNDYSIQSVFYFIYINLQISLAFLLASLFSNVKTAT 462


>gb|AFW62123.1| hypothetical protein ZEAMMB73_955959 [Zea mays]
          Length = 752

 Score = 89.4 bits (220), Expect(2) = 1e-28
 Identities = 43/89 (48%), Positives = 56/89 (62%)
 Frame = +3

Query: 207 FSLLDVITVMAYIYTFGSGLLGKFLFQDFLEDDSFPRSLVIVMEIFPSISLYRGLYDLQQ 386
           FS + + TV+ YIY FGSGLLG+FL + F+ED  FP+  V+VMEI P  SLYRGLY+  Q
Sbjct: 256 FSSVKIATVVGYIYVFGSGLLGEFLLRFFVEDTGFPKGWVVVMEIIPGFSLYRGLYEFGQ 315

Query: 387 XXXXXXXXXXXXXXWIDMNDRLNGMKEVL 473
                         W +++D LNGM+ VL
Sbjct: 316 YASAGNSMGTTGMKWSNLDDSLNGMRVVL 344



 Score = 62.0 bits (149), Expect(2) = 1e-28
 Identities = 30/46 (65%), Positives = 36/46 (78%)
 Frame = +2

Query: 2   GSITGLKIFTMNDYSIQFLFYFVYINLQIATAFLWATIFSSGKIAT 139
           GS+ GL  F  N YSIQF+FYF+YINLQI+ AFL ++ FSS KIAT
Sbjct: 218 GSLIGLDFFRKNAYSIQFVFYFIYINLQISLAFLVSSFFSSVKIAT 263


>ref|XP_003609037.1| ABC transporter A family member [Medicago truncatula]
           gi|355510092|gb|AES91234.1| ABC transporter A family
           member [Medicago truncatula]
          Length = 1083

 Score = 80.5 bits (197), Expect(2) = 2e-28
 Identities = 44/104 (42%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
 Frame = +3

Query: 180 FKPIHKSIEFSLLDVI-----TVMAYIYTFGSGLLGKFLFQDFLEDDSFPRSLVIVMEIF 344
           F  +  +    LL+V+      + AY+  FG+GLL  FLFQ+F+E  SFPR  +I ME++
Sbjct: 574 FSNVKTATGLFLLEVVHNNGCIITAYLVVFGTGLLACFLFQNFVEATSFPRGWIICMELY 633

Query: 345 PSISLYRGLYDL-QQXXXXXXXXXXXXXXWIDMNDRLNGMKEVL 473
           P  SLYRGLY+  Q               W D+ND  NGMKEVL
Sbjct: 634 PGFSLYRGLYEFAQSAATISSNSGTGGMLWQDLNDSTNGMKEVL 677



 Score = 70.1 bits (170), Expect(2) = 2e-28
 Identities = 31/46 (67%), Positives = 40/46 (86%)
 Frame = +2

Query: 5   SITGLKIFTMNDYSIQFLFYFVYINLQIATAFLWATIFSSGKIATG 142
           S +GLK FT+NDYSIQF+FYF+Y+NLQI+TAFL ++ FS+ K ATG
Sbjct: 537 SFSGLKFFTLNDYSIQFVFYFIYVNLQISTAFLLSSFFSNVKTATG 582


>ref|XP_003576447.1| PREDICTED: ABC transporter A family member 7-like [Brachypodium
           distachyon]
          Length = 945

 Score = 90.1 bits (222), Expect(2) = 6e-28
 Identities = 43/89 (48%), Positives = 58/89 (65%)
 Frame = +3

Query: 207 FSLLDVITVMAYIYTFGSGLLGKFLFQDFLEDDSFPRSLVIVMEIFPSISLYRGLYDLQQ 386
           FS + + TV+ YIY FGSGLLG FLF+ F+ED +FPR  ++VMEI P +SLYRGLY+L Q
Sbjct: 451 FSSVKMATVIGYIYVFGSGLLGAFLFRFFIEDRTFPRGWILVMEIVPGLSLYRGLYELGQ 510

Query: 387 XXXXXXXXXXXXXXWIDMNDRLNGMKEVL 473
                         W ++ D +NGM ++L
Sbjct: 511 YAFSGSAMGATGMMWENLKDPINGMCDIL 539



 Score = 58.9 bits (141), Expect(2) = 6e-28
 Identities = 29/46 (63%), Positives = 34/46 (73%)
 Frame = +2

Query: 2   GSITGLKIFTMNDYSIQFLFYFVYINLQIATAFLWATIFSSGKIAT 139
           GS+ GL  F +N Y IQF+F+FVYINLQIA AF  A  FSS K+AT
Sbjct: 413 GSLIGLNFFRVNSYGIQFVFFFVYINLQIAFAFSVACFFSSVKMAT 458


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