BLASTX nr result

ID: Coptis23_contig00038765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038765
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510454.1| hypothetical protein RCOM_1595950 [Ricinus c...    80   2e-13
ref|XP_002510452.1| pentatricopeptide repeat-containing protein,...    79   5e-13
ref|XP_003539332.1| PREDICTED: myrosinase-binding protein-like A...    76   2e-12
gb|ABC70328.1| agglutinin isoform [Castanea crenata]                   76   3e-12
ref|XP_002307683.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12

>ref|XP_002510454.1| hypothetical protein RCOM_1595950 [Ricinus communis]
           gi|223551155|gb|EEF52641.1| hypothetical protein
           RCOM_1595950 [Ricinus communis]
          Length = 540

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/73 (50%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
 Frame = +3

Query: 3   QLDYPKEFLKRVTGFYEFEFGDNGMVFVQSLCFFTNKKKYGPFGNERGTYFTSGR-NGKV 179
           +L+YP E L  + G+Y    G++    ++SL F+TNK KYGPFG E GT+FTS    GK+
Sbjct: 441 KLEYPHETLTSICGYYGSFTGEDSNSVIKSLTFYTNKGKYGPFGEEVGTFFTSSNTEGKI 500

Query: 180 VGFHGRGGAFLDA 218
           VGFHGR G +L+A
Sbjct: 501 VGFHGRSGCYLNA 513



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 40/71 (56%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
 Frame = +3

Query: 9   DYPKEFLKRVTGFYEFEFGDNGMVFVQSLCFFTNKKKYGPFGNERGTYFTSG-RNGKVVG 185
           DYP E L  VTG+Y       G   V+SL F TNK+KYGPFG+E+G  F+SG  NG VVG
Sbjct: 273 DYPSEILTHVTGYYGSTIL-RGPTVVKSLTFHTNKRKYGPFGDEQGISFSSGPNNGIVVG 331

Query: 186 FHGRGGAFLDA 218
           FHGR G F+D+
Sbjct: 332 FHGRKGWFIDS 342



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
 Frame = +3

Query: 3   QLDYPKEFLKRVTGFYEFEFGDNGMVFVQSLCFFTNKKKYGPFGNERGTYFTSG-RNGKV 179
           + DYP E+L  V+G Y       G V V+SL F TN++KYGPFG ++GT F+     G+V
Sbjct: 78  KFDYPDEYLVSVSGHYGSVVEYYGPVLVRSLMFQTNRRKYGPFGIQQGTQFSFPLTGGQV 137

Query: 180 VGFHGRGGAFLDA 218
           VGFHGR   +LD+
Sbjct: 138 VGFHGRSSWYLDS 150


>ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223551153|gb|EEF52639.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1218

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/73 (53%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
 Frame = +3

Query: 3    QLDYPKEFLKRVTGFYEFEFGDNGMVFVQSLCFFTNKKKYGPFGNERGTYFTS-GRNGKV 179
            +L+YP E L R++G+Y     D     V+SL F+T++ +YGPFG E GT+FTS    GKV
Sbjct: 1122 KLEYPHEVLTRISGYYGPASRDERPTVVKSLTFYTSRGQYGPFGEEIGTFFTSTTTEGKV 1181

Query: 180  VGFHGRGGAFLDA 218
            VGFHGR GA+LDA
Sbjct: 1182 VGFHGRCGAYLDA 1194



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/73 (53%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
 Frame = +3

Query: 3   QLDYPKEFLKRVTGFYEFEFGDNGMVFVQSLCFFTNKKKYGPFGNERGTYFT-SGRNGKV 179
           +LDYP E+L  V+G Y       G VFV+SL F +NK+ YGPFG E+GTYF+     G++
Sbjct: 696 KLDYPDEYLASVSGHYG-SLNQWGPVFVRSLTFQSNKRTYGPFGVEQGTYFSFPMTGGRI 754

Query: 180 VGFHGRGGAFLDA 218
           VGFHG+GG F+DA
Sbjct: 755 VGFHGKGGYFVDA 767



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
 Frame = +3

Query: 9    DYPKEFLKRVTGFYE--FEFGDNGMVFVQSLCFFTNKKKYGPFGNERGTYFTSGRN-GKV 179
            DYP E L  ++G Y      G N    ++SL F+TNK K+GPFG+E+G  F++  N GK+
Sbjct: 928  DYPYEILTHISGTYGPLMFMGPN---IIKSLTFYTNKGKHGPFGDEQGPSFSTKPNGGKI 984

Query: 180  VGFHGRGGAFLDA 218
            VGFHG+ G FLDA
Sbjct: 985  VGFHGKEGLFLDA 997


>ref|XP_003539332.1| PREDICTED: myrosinase-binding protein-like At1g52040-like [Glycine
           max]
          Length = 594

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 39/73 (53%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
 Frame = +3

Query: 3   QLDYPKEFLKRVTGFYEFEFGDNGMVFVQSLCFFTNKKKYGPFGNERGTYFT-SGRNGKV 179
           +LDYP+EFL  V G+Y       G +F++SL F +NKK YGPFG E+GTYF+     GK+
Sbjct: 76  KLDYPEEFLTSVDGYYG-SLNQWGPIFIRSLSFESNKKLYGPFGVEQGTYFSLPMTGGKI 134

Query: 180 VGFHGRGGAFLDA 218
           +GFHGR G  LDA
Sbjct: 135 IGFHGRYGWHLDA 147



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/71 (50%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
 Frame = +3

Query: 9   DYPKEFLKRVTGFYEFEFGDNGMVFVQSLCFFTNKKKYGPFGNERGTYFTSG-RNGKVVG 185
           D+P E L  ++G+Y       G   ++SL F T K+ YGPFG+E GTYFT+  R GKVVG
Sbjct: 305 DFPYEVLTHISGYYG-SLMYMGPAVIRSLTFHTTKRPYGPFGDEYGTYFTTKLREGKVVG 363

Query: 186 FHGRGGAFLDA 218
            HGR G FLD+
Sbjct: 364 IHGRSGLFLDS 374



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
 Frame = +3

Query: 3   QLDYPKEFLKRVTGFYEFEFGDNGMVFVQSLCFFTNKKKYGPFGNERGTYFTS-GRNGKV 179
           +L+YP E L  ++G+Y     D   + ++SL F T++ +YGPFG+E G YFTS    GKV
Sbjct: 498 KLEYPNEVLSCISGYYGSITADEQPIIIKSLTFHTSRGQYGPFGDEVGKYFTSTTTEGKV 557

Query: 180 VGFHGRGGAFLDA 218
           VG HGR   +LDA
Sbjct: 558 VGLHGRSSMYLDA 570


>gb|ABC70328.1| agglutinin isoform [Castanea crenata]
          Length = 310

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
 Frame = +3

Query: 3   QLDYPKEFLKRVTGFYEFEFGDNGMVFVQSLCFFTNKKKYGPFGNERGTYFTSG-RNGKV 179
           +L+  KEFL R+ GFY    G      ++S+ F+TNK KYGP+G+E G  FTS    G+V
Sbjct: 230 KLEVSKEFLIRIAGFYGPVEGSGSFKALRSITFYTNKAKYGPYGDEIGQAFTSSVAPGRV 289

Query: 180 VGFHGRGGAFLDA 218
           VGFHGR GA+LDA
Sbjct: 290 VGFHGRSGAYLDA 302


>ref|XP_002307683.1| predicted protein [Populus trichocarpa] gi|222857132|gb|EEE94679.1|
           predicted protein [Populus trichocarpa]
          Length = 80

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 41/73 (56%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
 Frame = +3

Query: 3   QLDYPKEFLKRVTGFYEFEFGDNGMVFVQSLCFFTNKKKYGPFGNERGTYFTSGRN-GKV 179
           +LDYP EFL  + G+Y    G  G VFV+SL F +NKK YGPFG E GTYF+   + GK+
Sbjct: 4   KLDYPHEFLTSIHGYYGSLDGW-GPVFVRSLTFQSNKKTYGPFGVEHGTYFSFPMSGGKI 62

Query: 180 VGFHGRGGAFLDA 218
           VGFHG  G +LDA
Sbjct: 63  VGFHGMSGWYLDA 75


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