BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038757
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36837.3| unnamed protein product [Vitis vinifera]              163   2e-38
ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2...   163   2e-38
emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]   162   2e-38
ref|XP_004136035.1| PREDICTED: mismatch repair endonuclease PMS2...   149   2e-34
ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [...   148   4e-34

>emb|CBI36837.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  163 bits (412), Expect = 2e-38
 Identities = 86/130 (66%), Positives = 97/130 (74%), Gaps = 10/130 (7%)
 Frame = -3

Query: 362 RQFYFVNGRPVDMPKLSKLVNELYKSANSRQYPIAIMNFTVPTRSYDVNVTPDKRKIFFS 183
           RQF+FVNGRPVDMPK+ KLVNELYK ANSRQYPIAIMNFTVPTR+YDVNVTPDKRKIFFS
Sbjct: 267 RQFFFVNGRPVDMPKVGKLVNELYKGANSRQYPIAIMNFTVPTRAYDVNVTPDKRKIFFS 326

Query: 182 DEGLIMQSLRGAIEKIYSPSQCSYSAKKLEEPKKENGSSDL-------CSYPKKLH---A 33
           DEG I+ SLR  +EKIYSPS  SYS  + EEP +E  +S+L        S  K+L    +
Sbjct: 327 DEGSILHSLREGLEKIYSPSLTSYSVNRFEEPTEETDNSELNPPQTQILSSSKQLFPDGS 386

Query: 32  PLTSECHVEE 3
            L  E H EE
Sbjct: 387 DLQEEAHSEE 396


>ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera]
          Length = 937

 Score =  163 bits (412), Expect = 2e-38
 Identities = 86/130 (66%), Positives = 97/130 (74%), Gaps = 10/130 (7%)
 Frame = -3

Query: 362 RQFYFVNGRPVDMPKLSKLVNELYKSANSRQYPIAIMNFTVPTRSYDVNVTPDKRKIFFS 183
           RQF+FVNGRPVDMPK+ KLVNELYK ANSRQYPIAIMNFTVPTR+YDVNVTPDKRKIFFS
Sbjct: 267 RQFFFVNGRPVDMPKVGKLVNELYKGANSRQYPIAIMNFTVPTRAYDVNVTPDKRKIFFS 326

Query: 182 DEGLIMQSLRGAIEKIYSPSQCSYSAKKLEEPKKENGSSDL-------CSYPKKLH---A 33
           DEG I+ SLR  +EKIYSPS  SYS  + EEP +E  +S+L        S  K+L    +
Sbjct: 327 DEGSILHSLREGLEKIYSPSLTSYSVNRFEEPTEETDNSELNPPQTQILSSSKQLFPDGS 386

Query: 32  PLTSECHVEE 3
            L  E H EE
Sbjct: 387 DLQEEAHSEE 396


>emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
          Length = 3804

 Score =  162 bits (411), Expect = 2e-38
 Identities = 78/101 (77%), Positives = 87/101 (86%)
 Frame = -3

Query: 362  RQFYFVNGRPVDMPKLSKLVNELYKSANSRQYPIAIMNFTVPTRSYDVNVTPDKRKIFFS 183
            RQF+FVNGRPVDMPK+ KLVNELYK ANSRQYPIAIMNFTVPTR+YDVNVTPDKRKIFFS
Sbjct: 2966 RQFFFVNGRPVDMPKVGKLVNELYKGANSRQYPIAIMNFTVPTRAYDVNVTPDKRKIFFS 3025

Query: 182  DEGLIMQSLRGAIEKIYSPSQCSYSAKKLEEPKKENGSSDL 60
            DEG I+ SLR  +EKIYSPS  SYS  + EEP +E  +S+L
Sbjct: 3026 DEGSILHSLREGLEKIYSPSLTSYSVNRFEEPTEETBNSEL 3066


>ref|XP_004136035.1| PREDICTED: mismatch repair endonuclease PMS2-like [Cucumis sativus]
           gi|449498483|ref|XP_004160549.1| PREDICTED: mismatch
           repair endonuclease PMS2-like [Cucumis sativus]
          Length = 921

 Score =  149 bits (377), Expect = 2e-34
 Identities = 74/108 (68%), Positives = 88/108 (81%)
 Frame = -3

Query: 362 RQFYFVNGRPVDMPKLSKLVNELYKSANSRQYPIAIMNFTVPTRSYDVNVTPDKRKIFFS 183
           RQF+FVN RPVDMPK+SKLVNELYKSANSRQYPIAI+NFT+P+++ DVNVTPDKRKIFFS
Sbjct: 267 RQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAILNFTLPSKACDVNVTPDKRKIFFS 326

Query: 182 DEGLIMQSLRGAIEKIYSPSQCSYSAKKLEEPKKENGSSDLCSYPKKL 39
           DE  I+Q+LR  + KIYSP+   YS  K+EEP  +  S +LCS   KL
Sbjct: 327 DETHILQTLREELLKIYSPTNACYSVNKVEEPTVQVDSLELCSDNGKL 374


>ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [Ricinus communis]
           gi|223537618|gb|EEF39241.1| DNA mismatch repair protein
           pms2, putative [Ricinus communis]
          Length = 924

 Score =  148 bits (374), Expect = 4e-34
 Identities = 73/107 (68%), Positives = 84/107 (78%)
 Frame = -3

Query: 362 RQFYFVNGRPVDMPKLSKLVNELYKSANSRQYPIAIMNFTVPTRSYDVNVTPDKRKIFFS 183
           RQ+YFVNGRPVDMPK++KLVNELY+ ANSRQYPIAIMNF VPTR+ DVNVTPDKRKIFFS
Sbjct: 264 RQYYFVNGRPVDMPKVTKLVNELYRGANSRQYPIAIMNFIVPTRACDVNVTPDKRKIFFS 323

Query: 182 DEGLIMQSLRGAIEKIYSPSQCSYSAKKLEEPKKENGSSDLCSYPKK 42
           DE  I+ +LR  ++ IYSPS  SYS  K EE  K   +S  CS  +K
Sbjct: 324 DETSILHALREGLQNIYSPSNASYSVNKFEERIKAASNSQSCSPHEK 370