BLASTX nr result

ID: Coptis23_contig00038756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038756
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283825.2| PREDICTED: chromosome-associated kinesin KIF...   223   1e-56
ref|XP_002514043.1| Chromosome-associated kinesin KIF4A, putativ...   219   2e-55
ref|XP_002301096.1| predicted protein [Populus trichocarpa] gi|2...   218   5e-55
ref|XP_002332472.1| predicted protein [Populus trichocarpa] gi|2...   216   1e-54
ref|NP_200901.2| kinesin family member 4/7/21/27 [Arabidopsis th...   216   2e-54

>ref|XP_002283825.2| PREDICTED: chromosome-associated kinesin KIF4-like [Vitis vinifera]
          Length = 1261

 Score =  223 bits (568), Expect = 1e-56
 Identities = 110/115 (95%), Positives = 114/115 (99%)
 Frame = -1

Query: 346 ANDDVGDDILCAKLHLVDLAGSERAKRTGADGLRLKEGIHINKGLLALGNVISALGDDKK 167
           +NDDVGDDILCAKLHLVDLAGSERAKRTGADG+R KEGIHINKGLLALGNVISALGD+KK
Sbjct: 245 SNDDVGDDILCAKLHLVDLAGSERAKRTGADGMRFKEGIHINKGLLALGNVISALGDEKK 304

Query: 166 RKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADSNAEETLNTLKYANRAR 2
           RKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPAD+NAEETLNTLKYANRAR
Sbjct: 305 RKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADTNAEETLNTLKYANRAR 359


>ref|XP_002514043.1| Chromosome-associated kinesin KIF4A, putative [Ricinus communis]
           gi|223547129|gb|EEF48626.1| Chromosome-associated
           kinesin KIF4A, putative [Ricinus communis]
          Length = 1290

 Score =  219 bits (557), Expect = 2e-55
 Identities = 108/114 (94%), Positives = 112/114 (98%)
 Frame = -1

Query: 343 NDDVGDDILCAKLHLVDLAGSERAKRTGADGLRLKEGIHINKGLLALGNVISALGDDKKR 164
           +DD GDDILCAKLHLVDLAGSERAKRTGADG+R KEGIHINKGLLALGNVISALGD+KKR
Sbjct: 254 HDDFGDDILCAKLHLVDLAGSERAKRTGADGMRFKEGIHINKGLLALGNVISALGDEKKR 313

Query: 163 KEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADSNAEETLNTLKYANRAR 2
           KEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPAD+NAEETLNTLKYANRAR
Sbjct: 314 KEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADTNAEETLNTLKYANRAR 367


>ref|XP_002301096.1| predicted protein [Populus trichocarpa] gi|222842822|gb|EEE80369.1|
           predicted protein [Populus trichocarpa]
          Length = 1290

 Score =  218 bits (554), Expect = 5e-55
 Identities = 106/114 (92%), Positives = 112/114 (98%)
 Frame = -1

Query: 343 NDDVGDDILCAKLHLVDLAGSERAKRTGADGLRLKEGIHINKGLLALGNVISALGDDKKR 164
           ND+ GDD+LCAKLHLVDLAGSERAKRTGADG+R KEGIHINKGLLALGNVISALGD+KKR
Sbjct: 246 NDEFGDDMLCAKLHLVDLAGSERAKRTGADGMRFKEGIHINKGLLALGNVISALGDEKKR 305

Query: 163 KEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADSNAEETLNTLKYANRAR 2
           KEGGH+PYRDSKLTRLLQDSLGGNSKTVMIACVSPAD+NAEETLNTLKYANRAR
Sbjct: 306 KEGGHIPYRDSKLTRLLQDSLGGNSKTVMIACVSPADTNAEETLNTLKYANRAR 359


>ref|XP_002332472.1| predicted protein [Populus trichocarpa] gi|222832555|gb|EEE71032.1|
           predicted protein [Populus trichocarpa]
          Length = 1229

 Score =  216 bits (551), Expect = 1e-54
 Identities = 108/115 (93%), Positives = 113/115 (98%), Gaps = 1/115 (0%)
 Frame = -1

Query: 343 NDDVGDDILCAKLHLVDLAGSERAKRTGADGLRLKEG-IHINKGLLALGNVISALGDDKK 167
           NDD+GDDILCAKLHLVDLAGSERAKRTGADG+R KEG IHINKGLLALGNVISALGD+KK
Sbjct: 246 NDDIGDDILCAKLHLVDLAGSERAKRTGADGMRFKEGSIHINKGLLALGNVISALGDEKK 305

Query: 166 RKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADSNAEETLNTLKYANRAR 2
           +KEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPAD+NAEETLNTLKYANRAR
Sbjct: 306 KKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADTNAEETLNTLKYANRAR 360


>ref|NP_200901.2| kinesin family member 4/7/21/27 [Arabidopsis thaliana]
           gi|332010015|gb|AED97398.1| kinesin family member
           4/7/21/27 [Arabidopsis thaliana]
          Length = 1294

 Score =  216 bits (550), Expect = 2e-54
 Identities = 107/113 (94%), Positives = 112/113 (99%)
 Frame = -1

Query: 340 DDVGDDILCAKLHLVDLAGSERAKRTGADGLRLKEGIHINKGLLALGNVISALGDDKKRK 161
           +D G+DILCAKLHLVDLAGSERAKRTGADG+RLKEGIHINKGLLALGNVISALGD+KKRK
Sbjct: 246 EDGGEDILCAKLHLVDLAGSERAKRTGADGMRLKEGIHINKGLLALGNVISALGDEKKRK 305

Query: 160 EGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADSNAEETLNTLKYANRAR 2
           EGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPAD+NAEETLNTLKYANRAR
Sbjct: 306 EGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADTNAEETLNTLKYANRAR 358


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