BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038753
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]   226   1e-57
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   226   1e-57
gb|ABW74566.1| integrase [Boechera divaricarpa]                       224   4e-57
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   222   2e-56
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]   215   3e-54

>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score =  226 bits (576), Expect = 1e-57
 Identities = 107/163 (65%), Positives = 132/163 (80%), Gaps = 1/163 (0%)
 Frame = +3

Query: 3    YVQQPQGFIVEGKEEKVYKLTKALYGLKQAPRAWYSRLDSYFESHGFNRSKSEPTLYVKV 182
            Y  QP+GFIV  KEE VY+L  ALYGLKQAPRAWYS++DSYF  +GF +SKSEP LY+K 
Sbjct: 1042 YXSQPEGFIVPDKEEHVYRLKXALYGLKQAPRAWYSKIDSYFVENGFEKSKSEPNLYLKR 1101

Query: 183  KG-TETLIVCVYVDDIIYTGSSSSLIKEFKDSMMHEFDMSDLGLLHYFLGLQIQQTPDGI 359
            +G  + LI+C+YVDD+IY GSSSSLI EFK  M  +F+MSDLGLLH+FLGL+++Q  DG+
Sbjct: 1102 QGKNDLLIICLYVDDMIYMGSSSSLINEFKACMKKKFEMSDLGLLHFFLGLEVKQVEDGV 1161

Query: 360  FISQEKYAVDLLKKFNMVNCKTSSTPMNTSEKLSINDGTVKAD 488
            F+SQ KYAVDLLKKFNM+NCK  + PMN++EKL   DGT +AD
Sbjct: 1162 FVSQRKYAVDLLKKFNMLNCKVVAIPMNSNEKLQAEDGTERAD 1204


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  226 bits (576), Expect = 1e-57
 Identities = 108/163 (66%), Positives = 133/163 (81%), Gaps = 1/163 (0%)
 Frame = +3

Query: 3    YVQQPQGFIVEGKEEKVYKLTKALYGLKQAPRAWYSRLDSYFESHGFNRSKSEPTLYVKV 182
            YV QPQGF++ G E KVYKL KALYGLKQAPRAWYS++DS+F+  GF RS +EPTLY+K 
Sbjct: 942  YVSQPQGFMITGNENKVYKLRKALYGLKQAPRAWYSKIDSFFQGSGFRRSDNEPTLYLKK 1001

Query: 183  KGT-ETLIVCVYVDDIIYTGSSSSLIKEFKDSMMHEFDMSDLGLLHYFLGLQIQQTPDGI 359
            +GT E L+VC+YVDD+IY GSS SL+ +FK +MM  F+MSDLGLL YFLGL++ Q  DGI
Sbjct: 1002 QGTDEFLLVCLYVDDMIYIGSSKSLVNDFKSNMMRNFEMSDLGLLKYFLGLEVIQDKDGI 1061

Query: 360  FISQEKYAVDLLKKFNMVNCKTSSTPMNTSEKLSINDGTVKAD 488
            FISQ+KYA DLLKKF M+NC+ ++TPMN +EKL   DGT KA+
Sbjct: 1062 FISQKKYAEDLLKKFQMMNCEVATTPMNINEKLQRADGTEKAN 1104


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  224 bits (572), Expect = 4e-57
 Identities = 105/163 (64%), Positives = 132/163 (80%), Gaps = 1/163 (0%)
 Frame = +3

Query: 3    YVQQPQGFIVEGKEEKVYKLTKALYGLKQAPRAWYSRLDSYFESHGFNRSKSEPTLYVKV 182
            YV QP+GFIVEG+E  VY+L KALYGLKQAPRAWY+++DSYF   GF RSKSEPTLY+K 
Sbjct: 773  YVDQPEGFIVEGREGFVYRLYKALYGLKQAPRAWYNKIDSYFAETGFERSKSEPTLYIKK 832

Query: 183  KGT-ETLIVCVYVDDIIYTGSSSSLIKEFKDSMMHEFDMSDLGLLHYFLGLQIQQTPDGI 359
            +G  + L+VC+YVDD+IY GSS+SL+ EFK SMM +F+M+DLGLL++FLGL+++Q  DG+
Sbjct: 833  QGAGDILVVCLYVDDMIYMGSSASLVSEFKASMMEKFEMTDLGLLYFFLGLEVKQVEDGV 892

Query: 360  FISQEKYAVDLLKKFNMVNCKTSSTPMNTSEKLSINDGTVKAD 488
            F+SQ KYA DLLK+F+M  C    TPMN +EKL   DGT KAD
Sbjct: 893  FVSQHKYACDLLKRFDMAGCNAVETPMNVNEKLLAGDGTEKAD 935


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  222 bits (566), Expect = 2e-56
 Identities = 106/163 (65%), Positives = 131/163 (80%), Gaps = 1/163 (0%)
 Frame = +3

Query: 3    YVQQPQGFIVEGKEEKVYKLTKALYGLKQAPRAWYSRLDSYFESHGFNRSKSEPTLYVKV 182
            YV Q +GFIV  KEE VY+L KALYGLKQAPRAWYS++DSYF  +GF RSKSEP LY+K 
Sbjct: 871  YVSQXEGFIVPXKEEHVYRLKKALYGLKQAPRAWYSKIDSYFVENGFERSKSEPNLYLKR 930

Query: 183  KG-TETLIVCVYVDDIIYTGSSSSLIKEFKDSMMHEFDMSDLGLLHYFLGLQIQQTPDGI 359
            +G  + LI+C+YVDD+IY GSSSSLI EFK  M  +F+MS+LGLLH+FL L+++Q  DG+
Sbjct: 931  QGKNDLLIICLYVDDMIYMGSSSSLINEFKACMKKKFEMSBLGLLHFFLXLEVKQVEDGV 990

Query: 360  FISQEKYAVDLLKKFNMVNCKTSSTPMNTSEKLSINDGTVKAD 488
            F+SQ KY VDLLKKFNM+NCK  +T MN++EKL   DGT +AD
Sbjct: 991  FVSQRKYXVDLLKKFNMLNCKVVATXMNSNEKLQAEDGTERAD 1033


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score =  215 bits (547), Expect = 3e-54
 Identities = 105/162 (64%), Positives = 126/162 (77%)
 Frame = +3

Query: 3    YVQQPQGFIVEGKEEKVYKLTKALYGLKQAPRAWYSRLDSYFESHGFNRSKSEPTLYVKV 182
            YV QP+GFIV  KEE VY+L KALYGLKQAPRAWYS++DSYF  +GF RSKSEP LY+K 
Sbjct: 803  YVSQPEGFIVPDKEEHVYRLKKALYGLKQAPRAWYSKIDSYFVENGFERSKSEPNLYLKR 862

Query: 183  KGTETLIVCVYVDDIIYTGSSSSLIKEFKDSMMHEFDMSDLGLLHYFLGLQIQQTPDGIF 362
            +           DD+IY GSSSSLI EFK  M  +F+MSDLGLLH+FLGL+++Q  DG+F
Sbjct: 863  Q-----------DDMIYMGSSSSLINEFKACMKKKFEMSDLGLLHFFLGLEVKQVEDGVF 911

Query: 363  ISQEKYAVDLLKKFNMVNCKTSSTPMNTSEKLSINDGTVKAD 488
            +SQ KYAVDLLKKFNM+NCK  +TPMN++EKL   DGT +AD
Sbjct: 912  VSQRKYAVDLLKKFNMLNCKVVATPMNSNEKLQAEDGTERAD 953