BLASTX nr result

ID: Coptis23_contig00038730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038730
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31915.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262...    90   2e-16
emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]    89   4e-16
ref|NP_001190749.1| uncharacterized protein [Arabidopsis thalian...    88   8e-16
ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arab...    88   8e-16

>emb|CBI31915.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/81 (51%), Positives = 57/81 (70%)
 Frame = -2

Query: 245 IETGKYSNPVPLIGLYTAGATLVCFVLLICDIWSAFRNKKSCLPCRLFSLNAITLTLVAI 66
           +    ++ P+P IG+Y A A+LVC + +  D + A R+KK   PC+ FSLNA +LT++A+
Sbjct: 12  VNDSNFNEPMPWIGIYVAAASLVCSLAMGADAFLALRHKKFWFPCKFFSLNATSLTIIAV 71

Query: 65  ATKLPVDLTTSMPSVQDQLSK 3
           ATKL VDL TSMP  QDQLSK
Sbjct: 72  ATKLSVDLNTSMPRCQDQLSK 92


>ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262529 [Vitis vinifera]
          Length = 754

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/81 (51%), Positives = 57/81 (70%)
 Frame = -2

Query: 245 IETGKYSNPVPLIGLYTAGATLVCFVLLICDIWSAFRNKKSCLPCRLFSLNAITLTLVAI 66
           +    ++ P+P IG+Y A A+LVC + +  D + A R+KK   PC+ FSLNA +LT++A+
Sbjct: 12  VNDSNFNEPMPWIGIYVAAASLVCSLAMGADAFLALRHKKFWFPCKFFSLNATSLTIIAV 71

Query: 65  ATKLPVDLTTSMPSVQDQLSK 3
           ATKL VDL TSMP  QDQLSK
Sbjct: 72  ATKLSVDLNTSMPRCQDQLSK 92


>emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]
          Length = 754

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/81 (51%), Positives = 56/81 (69%)
 Frame = -2

Query: 245 IETGKYSNPVPLIGLYTAGATLVCFVLLICDIWSAFRNKKSCLPCRLFSLNAITLTLVAI 66
           +    ++ P+P IG+Y A A+LVC + +  D + A R KK   PC+ FSLNA +LT++A+
Sbjct: 12  VNDSNFNXPMPWIGIYXAAASLVCSLAMGADAFXALRXKKFWFPCKFFSLNATSLTIIAV 71

Query: 65  ATKLPVDLTTSMPSVQDQLSK 3
           ATKL VDL TSMP  QDQLSK
Sbjct: 72  ATKLSVDLNTSMPRCQDQLSK 92


>ref|NP_001190749.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332658470|gb|AEE83870.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 647

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/85 (48%), Positives = 60/85 (70%)
 Frame = -2

Query: 257 NGTMIETGKYSNPVPLIGLYTAGATLVCFVLLICDIWSAFRNKKSCLPCRLFSLNAITLT 78
           +G + +T ++S P+P IG+Y A A+L+C V +  D+   FR++K   PC+ FSLNA TLT
Sbjct: 6   HGNLSDT-EFSKPLPSIGVYVAAASLICGVAMFSDLLHGFRHRKFWFPCKFFSLNATTLT 64

Query: 77  LVAIATKLPVDLTTSMPSVQDQLSK 3
            +++  KL +DL TSMPS QDQL+K
Sbjct: 65  FISVCVKLSLDLNTSMPSRQDQLAK 89


>ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arabidopsis lyrata subsp.
           lyrata] gi|297309169|gb|EFH39593.1| hypothetical protein
           ARALYDRAFT_494215 [Arabidopsis lyrata subsp. lyrata]
          Length = 748

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 40/81 (49%), Positives = 57/81 (70%)
 Frame = -2

Query: 245 IETGKYSNPVPLIGLYTAGATLVCFVLLICDIWSAFRNKKSCLPCRLFSLNAITLTLVAI 66
           +   ++S P+PLIG+Y A A+L+C + +  D+   FR++K   PC+ FSLNA +LT +A+
Sbjct: 12  LNDAEFSKPLPLIGIYVAVASLICGLAMAADLIHGFRHRKFWFPCKFFSLNATSLTFIAV 71

Query: 65  ATKLPVDLTTSMPSVQDQLSK 3
             KL VDL TSMPS QDQL+K
Sbjct: 72  GIKLSVDLNTSMPSRQDQLAK 92


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