BLASTX nr result

ID: Coptis23_contig00038726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038726
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266413.2| PREDICTED: U-box domain-containing protein 3...   126   2e-27
ref|NP_194851.2| Protein kinase protein with adenine nucleotide ...   125   5e-27
ref|XP_002867309.1| kinase family protein [Arabidopsis lyrata su...   125   5e-27
ref|XP_003631778.1| PREDICTED: U-box domain-containing protein 3...   124   6e-27
emb|CBI20806.3| unnamed protein product [Vitis vinifera]              124   6e-27

>ref|XP_002266413.2| PREDICTED: U-box domain-containing protein 35-like [Vitis vinifera]
          Length = 806

 Score =  126 bits (316), Expect = 2e-27
 Identities = 70/114 (61%), Positives = 83/114 (72%), Gaps = 10/114 (8%)
 Frame = +2

Query: 2   PSLYDHFDSGRTP---------SRLSNSSDIDNRSVDSMRSGNRSPDLSYANEYSTFSQE 154
           P  YD+ D+G  P          RLSNSSD++ R +    SG RS +L+Y+ + S+ S E
Sbjct: 268 PFSYDNLDTGMNPWLSNSSEMNPRLSNSSDLNTR-LSFASSGGRSSELNYSLDLSSSSNE 326

Query: 155 SGT-SWSSQNMEDVEAEMRRLKLELKQTMDMYSTACKEALTAKQKAMELHRWKM 313
           SG  SW+SQ+MEDVEAEMRRLKLELKQTMDMYSTACKEAL+AKQ A ELHRWKM
Sbjct: 327 SGRLSWASQSMEDVEAEMRRLKLELKQTMDMYSTACKEALSAKQTARELHRWKM 380


>ref|NP_194851.2| Protein kinase protein with adenine nucleotide alpha
           hydrolases-like domain [Arabidopsis thaliana]
           gi|91806758|gb|ABE66106.1| protein kinase family protein
           [Arabidopsis thaliana] gi|332660479|gb|AEE85879.1|
           Protein kinase protein with adenine nucleotide alpha
           hydrolases-like domain [Arabidopsis thaliana]
          Length = 764

 Score =  125 bits (313), Expect = 5e-27
 Identities = 69/105 (65%), Positives = 78/105 (74%), Gaps = 1/105 (0%)
 Frame = +2

Query: 2   PSLYDHFDSGRTPSRLSNSSDIDNRSVDSMRSGNRSPDLSYANEYSTFSQESGT-SWSSQ 178
           PSLYD+ D  RTP RLSN SD+D  S +SM  G RS DLS    +ST S E+   S +SQ
Sbjct: 273 PSLYDNSDPNRTPPRLSNFSDVDYCSFESMTFGRRSMDLSSPTAFSTGSFENERFSSASQ 332

Query: 179 NMEDVEAEMRRLKLELKQTMDMYSTACKEALTAKQKAMELHRWKM 313
             +DVEAEMRRLKLELKQTM+MYSTACKEALTAK KA EL RWK+
Sbjct: 333 GGDDVEAEMRRLKLELKQTMEMYSTACKEALTAKHKATELQRWKL 377


>ref|XP_002867309.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313145|gb|EFH43568.1| kinase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 765

 Score =  125 bits (313), Expect = 5e-27
 Identities = 69/105 (65%), Positives = 78/105 (74%), Gaps = 1/105 (0%)
 Frame = +2

Query: 2   PSLYDHFDSGRTPSRLSNSSDIDNRSVDSMRSGNRSPDLSYANEYSTFSQESGT-SWSSQ 178
           PSLYD+ D  RTP RLSN SDID  S +SM  G RS D+S    +ST S E+   S +SQ
Sbjct: 273 PSLYDNSDPNRTPPRLSNFSDIDYGSFESMTFGRRSMDISSPTAFSTGSFENERFSSASQ 332

Query: 179 NMEDVEAEMRRLKLELKQTMDMYSTACKEALTAKQKAMELHRWKM 313
             +DVEAEMRRLKLELKQTM+MYSTACKEALTAK KA EL RWK+
Sbjct: 333 GGDDVEAEMRRLKLELKQTMEMYSTACKEALTAKHKATELQRWKL 377


>ref|XP_003631778.1| PREDICTED: U-box domain-containing protein 35-like [Vitis vinifera]
          Length = 796

 Score =  124 bits (312), Expect = 6e-27
 Identities = 66/106 (62%), Positives = 81/106 (76%), Gaps = 2/106 (1%)
 Frame = +2

Query: 2   PSLYD-HFDSGRTPSRLSNSSDIDNRSVDSMRSGNRSPDLSYANEYSTFSQESG-TSWSS 175
           P  YD + D  R+  RLSNSSD+DN++ +S + G +S ++    E+   SQE+  TSWSS
Sbjct: 270 PPFYDSNIDIIRSNPRLSNSSDMDNQTFESSQMGRKSMEIGSPPEFLAISQENDRTSWSS 329

Query: 176 QNMEDVEAEMRRLKLELKQTMDMYSTACKEALTAKQKAMELHRWKM 313
           Q+ EDVEAEMRRLKLELKQTMDMYSTACKEAL+AKQKA EL RWK+
Sbjct: 330 QSAEDVEAEMRRLKLELKQTMDMYSTACKEALSAKQKARELQRWKL 375


>emb|CBI20806.3| unnamed protein product [Vitis vinifera]
          Length = 1126

 Score =  124 bits (312), Expect = 6e-27
 Identities = 66/106 (62%), Positives = 81/106 (76%), Gaps = 2/106 (1%)
 Frame = +2

Query: 2   PSLYD-HFDSGRTPSRLSNSSDIDNRSVDSMRSGNRSPDLSYANEYSTFSQESG-TSWSS 175
           P  YD + D  R+  RLSNSSD+DN++ +S + G +S ++    E+   SQE+  TSWSS
Sbjct: 675 PPFYDSNIDIIRSNPRLSNSSDMDNQTFESSQMGRKSMEIGSPPEFLAISQENDRTSWSS 734

Query: 176 QNMEDVEAEMRRLKLELKQTMDMYSTACKEALTAKQKAMELHRWKM 313
           Q+ EDVEAEMRRLKLELKQTMDMYSTACKEAL+AKQKA EL RWK+
Sbjct: 735 QSAEDVEAEMRRLKLELKQTMDMYSTACKEALSAKQKARELQRWKL 780


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