BLASTX nr result

ID: Coptis23_contig00038721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038721
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543060.1| PREDICTED: uncharacterized protein LOC100812...   160   8e-38
ref|XP_003541539.1| PREDICTED: uncharacterized protein LOC100793...   155   4e-36
ref|XP_002305019.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_002267898.2| PREDICTED: uncharacterized protein LOC100265...   149   2e-34
ref|XP_002519035.1| conserved hypothetical protein [Ricinus comm...   149   2e-34

>ref|XP_003543060.1| PREDICTED: uncharacterized protein LOC100812938 [Glycine max]
          Length = 1189

 Score =  160 bits (406), Expect = 8e-38
 Identities = 84/142 (59%), Positives = 107/142 (75%), Gaps = 3/142 (2%)
 Frame = +2

Query: 2   IVLHPIFRNPASSVEEKTPMQTVWVTRVDRSIQPMNEWECSQEAASVSVSSDNQNTPLVG 181
           +VLHPIF NP SS+  + PMQTVW T+VD SI P N+++ + +A +V +++D Q     G
Sbjct: 417 VVLHPIFGNPTSSMGGQPPMQTVWQTKVDLSIPPTNDFK-NHQAPAVGMNTDIQKVSEFG 475

Query: 182 --KAKRLSFYPFNLPSDVRTLARIVYSPQG-EVAVSFLNGGVHIFSGASFAPVGNYHGNV 352
             K+KR++F PF+LPSDVR LARIVYSP G E+A++FL GGVHIFSG +FAPV NY  +V
Sbjct: 476 FDKSKRVNFDPFDLPSDVRALARIVYSPHGGEIAIAFLRGGVHIFSGPNFAPVDNYQISV 535

Query: 353 VSAIAAPTFSSSGYCLASVWHD 418
            SAIAAP FSS+  C ASVWHD
Sbjct: 536 GSAIAAPAFSSTSCCSASVWHD 557


>ref|XP_003541539.1| PREDICTED: uncharacterized protein LOC100793949 [Glycine max]
          Length = 1244

 Score =  155 bits (391), Expect = 4e-36
 Identities = 81/142 (57%), Positives = 103/142 (72%), Gaps = 3/142 (2%)
 Frame = +2

Query: 2   IVLHPIFRNPASSVEEKTPMQTVWVTRVDRSIQPMNEWECSQEAASVSVSSDNQNTP--L 175
           +VLHPIF NP SS+  + PMQTVW ++VD SI P N+++  Q  A + +SSD Q     +
Sbjct: 481 VVLHPIFGNPTSSMGGQPPMQTVWQSKVDLSIPPTNDFKNHQSPA-IGMSSDVQKVSESV 539

Query: 176 VGKAKRLSFYPFNLPSDVRTLARIVYSPQG-EVAVSFLNGGVHIFSGASFAPVGNYHGNV 352
             K+KR++F PF+LPSDVR LAR+VYS  G E+A++FL GGVH+FSG +F PV NY  NV
Sbjct: 540 SDKSKRVNFDPFDLPSDVRALARVVYSAHGGEIAIAFLRGGVHVFSGPNFTPVDNYQINV 599

Query: 353 VSAIAAPTFSSSGYCLASVWHD 418
            SAIAAP FSS+  C ASVWHD
Sbjct: 600 GSAIAAPAFSSTSCCSASVWHD 621


>ref|XP_002305019.1| predicted protein [Populus trichocarpa] gi|222847983|gb|EEE85530.1|
           predicted protein [Populus trichocarpa]
          Length = 741

 Score =  150 bits (379), Expect = 1e-34
 Identities = 80/141 (56%), Positives = 99/141 (70%), Gaps = 2/141 (1%)
 Frame = +2

Query: 2   IVLHPIFRNPASSVEEKTPMQTVWVTRVDRSIQPMNEWECSQEAASVSVSSDNQNTPLVG 181
           +VLHPIF NP S    + PMQTVWV++VD SI P N+++  Q A +V +S   + +    
Sbjct: 373 VVLHPIFGNPTSGFGGQAPMQTVWVSKVDTSIPPTNDFKNLQAAPAVPISDARKASDSGS 432

Query: 182 -KAKRLSFYPFNLPSDVRTLARIVYSPQG-EVAVSFLNGGVHIFSGASFAPVGNYHGNVV 355
            K KR++F P +LPSDVRTLARIVYS  G E+A++FL GGVHIFSG +F  V NY  NV 
Sbjct: 433 EKTKRVTFDPSDLPSDVRTLARIVYSAHGGEIAIAFLRGGVHIFSGPNFTVVDNYQINVG 492

Query: 356 SAIAAPTFSSSGYCLASVWHD 418
           SAIAAP FSS+  C ASVWHD
Sbjct: 493 SAIAAPAFSSTSCCSASVWHD 513


>ref|XP_002267898.2| PREDICTED: uncharacterized protein LOC100265327, partial [Vitis
           vinifera]
          Length = 785

 Score =  149 bits (377), Expect = 2e-34
 Identities = 77/140 (55%), Positives = 97/140 (69%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2   IVLHPIFRNPASSVEEKTPMQTVWVTRVDRSIQPMNEWECSQEAASVSVSSDNQNTPLVG 181
           +VLH IF NP SS   + P+QTVW T+V++SI P ++++  Q  A+   S  N +   + 
Sbjct: 36  VVLHQIFGNPTSSFGGQAPVQTVWQTKVNKSIPPTSDFKSQQTPATGPTSERNTSDSSMD 95

Query: 182 KAKRLSFYPFNLPSDVRTLARIVYSPQ-GEVAVSFLNGGVHIFSGASFAPVGNYHGNVVS 358
             KR+SF PF+LPSDVRTLA+I YS   GE+AV+FL GGVHIFSG +F PV NY  NV S
Sbjct: 96  MGKRVSFDPFDLPSDVRTLAQISYSAHGGEIAVAFLRGGVHIFSGPNFTPVDNYQINVGS 155

Query: 359 AIAAPTFSSSGYCLASVWHD 418
           AIA P FSS+  C ASVWHD
Sbjct: 156 AIATPAFSSTSCCSASVWHD 175


>ref|XP_002519035.1| conserved hypothetical protein [Ricinus communis]
           gi|223541698|gb|EEF43246.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1255

 Score =  149 bits (376), Expect = 2e-34
 Identities = 80/141 (56%), Positives = 100/141 (70%), Gaps = 2/141 (1%)
 Frame = +2

Query: 2   IVLHPIFRNPASSVEEKTPMQTVWVTRVDRSIQPMNEWECSQE-AASVSVSSDNQNTPLV 178
           +VLH IF NP SS   + PMQTVWV++VD SI P N+++  Q  +A  +  +   +   V
Sbjct: 481 VVLHQIFGNPTSSFGGQAPMQTVWVSKVDTSIPPTNDFKNHQTVSAGPAPDARKASDSGV 540

Query: 179 GKAKRLSFYPFNLPSDVRTLARIVYSPQG-EVAVSFLNGGVHIFSGASFAPVGNYHGNVV 355
            KAK L+F PF+LPSDVR+LARIVYS  G E+A++FL GGVHIFSG +F PV +Y  NV 
Sbjct: 541 EKAKSLTFDPFDLPSDVRSLARIVYSAHGGEIAIAFLRGGVHIFSGPNFTPVDSYQINVG 600

Query: 356 SAIAAPTFSSSGYCLASVWHD 418
           SAIAAP FSS+  C ASVWHD
Sbjct: 601 SAIAAPAFSSTSCCSASVWHD 621


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