BLASTX nr result

ID: Coptis23_contig00038697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038697
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66871.1| hypothetical protein VITISV_021425 [Vitis vinifera]    97   1e-18
emb|CAN60751.1| hypothetical protein VITISV_044288 [Vitis vinifera]    92   3e-17
emb|CAN82144.1| hypothetical protein VITISV_043495 [Vitis vinifera]    92   6e-17
ref|XP_003557017.1| PREDICTED: uncharacterized protein LOC100801...    88   8e-16
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...    82   4e-14

>emb|CAN66871.1| hypothetical protein VITISV_021425 [Vitis vinifera]
          Length = 338

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 53/113 (46%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
 Frame = +2

Query: 8   CKIYDKSNDSPLIAKIKMGTNRSFPIEFKYAGDAALQCEGEGDIWL*HKRFCHLNFRVXX 187
           C IYD      L+ KIKM  NRSFPI FKYA + AL+ E   + WL H+RF HLNF    
Sbjct: 142 CTIYDNEQRRNLVKKIKMEKNRSFPIVFKYAENVALRMEDVEEAWLWHRRFGHLNFNSLK 201

Query: 188 XXXXXXXXXXXPE-IKGEADVCEGCVMGKQHRVPFAQGSPWRAKAPLELIIHT 343
                      P  I+ + +VC+GC +GK HR  F +G  WRAK  LEL IHT
Sbjct: 202 MLYQRKMVQGLPNTIEEKNEVCDGCALGKHHRQSFLKGVAWRAKKVLEL-IHT 253


>emb|CAN60751.1| hypothetical protein VITISV_044288 [Vitis vinifera]
          Length = 633

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 48/104 (46%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
 Frame = +2

Query: 8   CKIYDKSNDSPLIAKIKMGTNRSFPIEFKYAGDAALQCEGEGDIWL*HKRFCHLNFRVXX 187
           C IYDK     L+ KIKM  NRSFPI FKY  + AL+ E   + WL H+RF HLNF    
Sbjct: 148 CTIYDKEQRRNLVKKIKMEKNRSFPIVFKYVENVALRMEDVEEAWLWHRRFGHLNFNSLK 207

Query: 188 XXXXXXXXXXXPEIKGEA-DVCEGCVMGKQHRVPFAQGSPWRAK 316
                      P I  E  +VC+GC +GK HR  F +G  WRAK
Sbjct: 208 MLCQRKMVQGLPNIIEEKNEVCDGCALGKHHRQSFPKGVAWRAK 251


>emb|CAN82144.1| hypothetical protein VITISV_043495 [Vitis vinifera]
          Length = 567

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 51/113 (45%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
 Frame = +2

Query: 8   CKIYDKSNDSPLIAKIKMGTNRSFPIEFKYAGDAALQCEGEGDIWL*HKRFCHLNFRVXX 187
           C IYDK     L+ KIKM  N+S PI FKYA + AL+ E   + WL H+RF HLNF    
Sbjct: 79  CIIYDKEKRRNLVKKIKMEKNKSIPIVFKYAENVALRNEDVEEAWLWHRRFGHLNFNRLK 138

Query: 188 XXXXXXXXXXXPE-IKGEADVCEGCVMGKQHRVPFAQGSPWRAKAPLELIIHT 343
                      P  I+ + ++CE C +GK HR  F +G  WRAK  LEL IHT
Sbjct: 139 MLCQRKMVQRLPNTIEEKNEICEDCXLGKHHRQSFXKGVAWRAKKVLEL-IHT 190


>ref|XP_003557017.1| PREDICTED: uncharacterized protein LOC100801364 [Glycine max]
          Length = 890

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
 Frame = +2

Query: 11  KIYDKSNDSPLIAKIKMG-TNRSFPIEFKYAGDAALQCEGEGDIWL*HKRFCHLNFRVXX 187
           KI D  N    IA++KM  +NRSFP+  KYA + A++ + + D WL ++RF H N     
Sbjct: 130 KILDNKNKRSEIAQVKMNKSNRSFPLNLKYATNIAMKVQVD-DSWLWNQRFDHFNTHALK 188

Query: 188 XXXXXXXXXXXPEIKGEADVCEGCVMGKQHRVPFAQGSPWRAKAPLELIIHT 343
                      P IK   +VCEGC++GKQHR PF+    WRAK  LEL IHT
Sbjct: 189 LLHEKSMMRDLPSIKENNEVCEGCLLGKQHRFPFSTSGAWRAKDLLEL-IHT 239


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108711922|gb|ABF99717.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1335

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 46/111 (41%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
 Frame = +2

Query: 5   ACKIYDKSNDSPLIAKIKMGTNRSFPIEFKYAGDAALQCEGE-GDIWL*HKRFCHLNFRV 181
           +CKI D+ N+  L+AKI M  NR+F +   +    AL+ E +  D+W  HKR  HLN+R 
Sbjct: 413 SCKILDRKNNR-LVAKINMEKNRNFLLRMNHTTQMALRSEVDISDLW--HKRMGHLNYRA 469

Query: 182 XXXXXXXXXXXXXPEIKGEADVCEGCVMGKQHRVPFAQGSPWRAKAPLELI 334
                        P I  ++D CEGCV GKQ R  F     WRA APLEL+
Sbjct: 470 LKLLRTKGMVQGLPFITLKSDPCEGCVFGKQIRASFPHSGAWRASAPLELV 520


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