BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038685
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314181.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containi...   113   2e-23
ref|XP_002532856.1| pentatricopeptide repeat-containing protein,...   111   7e-23
emb|CBI16134.3| unnamed protein product [Vitis vinifera]              109   3e-22
ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22

>ref|XP_002314181.1| predicted protein [Populus trichocarpa] gi|222850589|gb|EEE88136.1|
           predicted protein [Populus trichocarpa]
          Length = 525

 Score =  115 bits (288), Expect = 4e-24
 Identities = 53/79 (67%), Positives = 61/79 (77%)
 Frame = +2

Query: 86  RVEKLGKEEAVTCAFQSWMGDGFPIHRGDIFHAIXXXXXXXXXXXALEVMEWVIRERPYK 265
           R+EKL + E+V  AFQSWMG+GFPIHRGD+FH I           ALEVMEWV+RERPY+
Sbjct: 62  RIEKLPRGESVGYAFQSWMGEGFPIHRGDVFHTINRLRKLRLNKRALEVMEWVVRERPYR 121

Query: 266 LKELDYSYLLEFTFKFHGV 322
           LKELDYSYLLEFT K HG+
Sbjct: 122 LKELDYSYLLEFTTKHHGI 140


>ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
           mitochondrial-like [Cucumis sativus]
           gi|449517541|ref|XP_004165804.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g07590,
           mitochondrial-like [Cucumis sativus]
          Length = 527

 Score =  113 bits (282), Expect = 2e-23
 Identities = 52/79 (65%), Positives = 60/79 (75%)
 Frame = +2

Query: 86  RVEKLGKEEAVTCAFQSWMGDGFPIHRGDIFHAIXXXXXXXXXXXALEVMEWVIRERPYK 265
           R+E++ K E V  AF+SWMGDGFPIHRGDIFHAI           ALEVMEWVIRE+PY+
Sbjct: 63  RIERIPKGELVGYAFRSWMGDGFPIHRGDIFHAINRLRKLERNKRALEVMEWVIREKPYR 122

Query: 266 LKELDYSYLLEFTFKFHGV 322
           + ELDYSYLLEFT K HG+
Sbjct: 123 INELDYSYLLEFTIKHHGI 141


>ref|XP_002532856.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527393|gb|EEF29534.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 521

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/79 (65%), Positives = 59/79 (74%)
 Frame = +2

Query: 86  RVEKLGKEEAVTCAFQSWMGDGFPIHRGDIFHAIXXXXXXXXXXXALEVMEWVIRERPYK 265
           R+EKL + E +  AFQSWM +GFPIHRGD+FHAI           ALEVMEWVIRERPY+
Sbjct: 58  RIEKLPRGEPIGLAFQSWMREGFPIHRGDVFHAINRLRKLKLNKRALEVMEWVIRERPYR 117

Query: 266 LKELDYSYLLEFTFKFHGV 322
            KELDYSYLLEFT K HG+
Sbjct: 118 PKELDYSYLLEFTTKLHGI 136


>emb|CBI16134.3| unnamed protein product [Vitis vinifera]
          Length = 453

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/80 (65%), Positives = 59/80 (73%)
 Frame = +2

Query: 83  FRVEKLGKEEAVTCAFQSWMGDGFPIHRGDIFHAIXXXXXXXXXXXALEVMEWVIRERPY 262
           +R+EKL + E V  AFQSWMG+G PIHRG IFHAI           ALEVMEWV+RERPY
Sbjct: 62  WRIEKLPRGEPVGLAFQSWMGEGCPIHRGHIFHAINRLRKLKFNKRALEVMEWVVRERPY 121

Query: 263 KLKELDYSYLLEFTFKFHGV 322
           + KELDYSYLLEFT K HG+
Sbjct: 122 RPKELDYSYLLEFTTKLHGI 141


>ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
           mitochondrial [Vitis vinifera]
          Length = 550

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/80 (65%), Positives = 59/80 (73%)
 Frame = +2

Query: 83  FRVEKLGKEEAVTCAFQSWMGDGFPIHRGDIFHAIXXXXXXXXXXXALEVMEWVIRERPY 262
           +R+EKL + E V  AFQSWMG+G PIHRG IFHAI           ALEVMEWV+RERPY
Sbjct: 86  WRIEKLPRGEPVGLAFQSWMGEGCPIHRGHIFHAINRLRKLKFNKRALEVMEWVVRERPY 145

Query: 263 KLKELDYSYLLEFTFKFHGV 322
           + KELDYSYLLEFT K HG+
Sbjct: 146 RPKELDYSYLLEFTTKLHGI 165