BLASTX nr result

ID: Coptis23_contig00038683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038683
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA21111.1| endo-1,4-beta-glucanase [Gossypium hirsutum]          103   1e-20
ref|XP_002270880.1| PREDICTED: endoglucanase 6 [Vitis vinifera] ...    99   3e-19
ref|XP_003530388.1| PREDICTED: endoglucanase 6-like [Glycine max]      97   1e-18
gb|AFZ78641.1| korrigan [Populus tomentosa]                            96   4e-18
ref|XP_002303645.1| glycosyl hydrolase family 9 [Populus trichoc...    96   4e-18

>dbj|BAA21111.1| endo-1,4-beta-glucanase [Gossypium hirsutum]
          Length = 324

 Score =  103 bits (257), Expect = 1e-20
 Identities = 46/65 (70%), Positives = 56/65 (86%)
 Frame = -3

Query: 327 KGNETLKSLIISLQKLYGPLWGLTKSAGSYGFPAWLDSLAAGKRLEFVYVHSASPADISV 148
           K  +TLK+L +S+ KLYGP+WGLTKS  SYGFP WL+SL AGK LEFVY+H+ASPAD+SV
Sbjct: 259 KSYKTLKALKLSISKLYGPIWGLTKSGNSYGFPEWLNSLPAGKSLEFVYIHAASPADVSV 318

Query: 147 SSYNL 133
           SSYN+
Sbjct: 319 SSYNI 323


>ref|XP_002270880.1| PREDICTED: endoglucanase 6 [Vitis vinifera]
           gi|147821654|emb|CAN66000.1| hypothetical protein
           VITISV_031862 [Vitis vinifera]
           gi|297742327|emb|CBI34476.3| unnamed protein product
           [Vitis vinifera]
          Length = 629

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 44/65 (67%), Positives = 55/65 (84%)
 Frame = -3

Query: 327 KGNETLKSLIISLQKLYGPLWGLTKSAGSYGFPAWLDSLAAGKRLEFVYVHSASPADISV 148
           K  +TLK L +++ KLYGPLWGLTKS  SYGFP+WL +LAAG++LEFVY+HSA PA++SV
Sbjct: 564 KSAKTLKDLELTISKLYGPLWGLTKSGDSYGFPSWLKALAAGEKLEFVYIHSADPAEVSV 623

Query: 147 SSYNL 133
           SSY L
Sbjct: 624 SSYTL 628


>ref|XP_003530388.1| PREDICTED: endoglucanase 6-like [Glycine max]
          Length = 625

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 43/65 (66%), Positives = 55/65 (84%)
 Frame = -3

Query: 327 KGNETLKSLIISLQKLYGPLWGLTKSAGSYGFPAWLDSLAAGKRLEFVYVHSASPADISV 148
           K N++L SL +S+ KLYGP+WG+TKS  SY FP+WL SL+AGK LEFVY+HSASPAD+SV
Sbjct: 560 KSNKSLNSLNLSISKLYGPIWGVTKSGDSYTFPSWLSSLSAGKSLEFVYIHSASPADVSV 619

Query: 147 SSYNL 133
           ++Y L
Sbjct: 620 ANYVL 624


>gb|AFZ78641.1| korrigan [Populus tomentosa]
          Length = 622

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 44/65 (67%), Positives = 52/65 (80%)
 Frame = -3

Query: 327 KGNETLKSLIISLQKLYGPLWGLTKSAGSYGFPAWLDSLAAGKRLEFVYVHSASPADISV 148
           K  + LK + +S+ KLYGPLWGLTKS  SY FP+W+ SL AGK LEFVY+HSAS ADISV
Sbjct: 557 KSAKELKDIKLSISKLYGPLWGLTKSGNSYAFPSWMSSLPAGKSLEFVYIHSASAADISV 616

Query: 147 SSYNL 133
           SSY+L
Sbjct: 617 SSYSL 621


>ref|XP_002303645.1| glycosyl hydrolase family 9 [Populus trichocarpa]
           gi|222841077|gb|EEE78624.1| glycosyl hydrolase family 9
           [Populus trichocarpa] gi|347466589|gb|AEO97207.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
           gi|347466643|gb|AEO97234.1| endo-1,4-beta-glucanase
           [Populus trichocarpa]
          Length = 622

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 44/65 (67%), Positives = 52/65 (80%)
 Frame = -3

Query: 327 KGNETLKSLIISLQKLYGPLWGLTKSAGSYGFPAWLDSLAAGKRLEFVYVHSASPADISV 148
           K  + LK + +S+ KLYGPLWGLTKS  SY FP+W+ SL AGK LEFVY+HSAS ADISV
Sbjct: 557 KSAKELKDIKLSISKLYGPLWGLTKSGNSYAFPSWMSSLPAGKSLEFVYIHSASAADISV 616

Query: 147 SSYNL 133
           SSY+L
Sbjct: 617 SSYSL 621


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