BLASTX nr result
ID: Coptis23_contig00038683
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00038683 (515 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAA21111.1| endo-1,4-beta-glucanase [Gossypium hirsutum] 103 1e-20 ref|XP_002270880.1| PREDICTED: endoglucanase 6 [Vitis vinifera] ... 99 3e-19 ref|XP_003530388.1| PREDICTED: endoglucanase 6-like [Glycine max] 97 1e-18 gb|AFZ78641.1| korrigan [Populus tomentosa] 96 4e-18 ref|XP_002303645.1| glycosyl hydrolase family 9 [Populus trichoc... 96 4e-18 >dbj|BAA21111.1| endo-1,4-beta-glucanase [Gossypium hirsutum] Length = 324 Score = 103 bits (257), Expect = 1e-20 Identities = 46/65 (70%), Positives = 56/65 (86%) Frame = -3 Query: 327 KGNETLKSLIISLQKLYGPLWGLTKSAGSYGFPAWLDSLAAGKRLEFVYVHSASPADISV 148 K +TLK+L +S+ KLYGP+WGLTKS SYGFP WL+SL AGK LEFVY+H+ASPAD+SV Sbjct: 259 KSYKTLKALKLSISKLYGPIWGLTKSGNSYGFPEWLNSLPAGKSLEFVYIHAASPADVSV 318 Query: 147 SSYNL 133 SSYN+ Sbjct: 319 SSYNI 323 >ref|XP_002270880.1| PREDICTED: endoglucanase 6 [Vitis vinifera] gi|147821654|emb|CAN66000.1| hypothetical protein VITISV_031862 [Vitis vinifera] gi|297742327|emb|CBI34476.3| unnamed protein product [Vitis vinifera] Length = 629 Score = 99.4 bits (246), Expect = 3e-19 Identities = 44/65 (67%), Positives = 55/65 (84%) Frame = -3 Query: 327 KGNETLKSLIISLQKLYGPLWGLTKSAGSYGFPAWLDSLAAGKRLEFVYVHSASPADISV 148 K +TLK L +++ KLYGPLWGLTKS SYGFP+WL +LAAG++LEFVY+HSA PA++SV Sbjct: 564 KSAKTLKDLELTISKLYGPLWGLTKSGDSYGFPSWLKALAAGEKLEFVYIHSADPAEVSV 623 Query: 147 SSYNL 133 SSY L Sbjct: 624 SSYTL 628 >ref|XP_003530388.1| PREDICTED: endoglucanase 6-like [Glycine max] Length = 625 Score = 97.1 bits (240), Expect = 1e-18 Identities = 43/65 (66%), Positives = 55/65 (84%) Frame = -3 Query: 327 KGNETLKSLIISLQKLYGPLWGLTKSAGSYGFPAWLDSLAAGKRLEFVYVHSASPADISV 148 K N++L SL +S+ KLYGP+WG+TKS SY FP+WL SL+AGK LEFVY+HSASPAD+SV Sbjct: 560 KSNKSLNSLNLSISKLYGPIWGVTKSGDSYTFPSWLSSLSAGKSLEFVYIHSASPADVSV 619 Query: 147 SSYNL 133 ++Y L Sbjct: 620 ANYVL 624 >gb|AFZ78641.1| korrigan [Populus tomentosa] Length = 622 Score = 95.5 bits (236), Expect = 4e-18 Identities = 44/65 (67%), Positives = 52/65 (80%) Frame = -3 Query: 327 KGNETLKSLIISLQKLYGPLWGLTKSAGSYGFPAWLDSLAAGKRLEFVYVHSASPADISV 148 K + LK + +S+ KLYGPLWGLTKS SY FP+W+ SL AGK LEFVY+HSAS ADISV Sbjct: 557 KSAKELKDIKLSISKLYGPLWGLTKSGNSYAFPSWMSSLPAGKSLEFVYIHSASAADISV 616 Query: 147 SSYNL 133 SSY+L Sbjct: 617 SSYSL 621 >ref|XP_002303645.1| glycosyl hydrolase family 9 [Populus trichocarpa] gi|222841077|gb|EEE78624.1| glycosyl hydrolase family 9 [Populus trichocarpa] gi|347466589|gb|AEO97207.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466643|gb|AEO97234.1| endo-1,4-beta-glucanase [Populus trichocarpa] Length = 622 Score = 95.5 bits (236), Expect = 4e-18 Identities = 44/65 (67%), Positives = 52/65 (80%) Frame = -3 Query: 327 KGNETLKSLIISLQKLYGPLWGLTKSAGSYGFPAWLDSLAAGKRLEFVYVHSASPADISV 148 K + LK + +S+ KLYGPLWGLTKS SY FP+W+ SL AGK LEFVY+HSAS ADISV Sbjct: 557 KSAKELKDIKLSISKLYGPLWGLTKSGNSYAFPSWMSSLPAGKSLEFVYIHSASAADISV 616 Query: 147 SSYNL 133 SSY+L Sbjct: 617 SSYSL 621