BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038678
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623082.1| F-box [Medicago truncatula] gi|355498097|gb|...    65   4e-09
gb|AFK44336.1| unknown [Lotus japonicus]                               62   6e-08
ref|XP_002520898.1| conserved hypothetical protein [Ricinus comm...    62   6e-08
ref|XP_003623087.1| F-box protein [Medicago truncatula] gi|35549...    61   1e-07
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...    59   4e-07

>ref|XP_003623082.1| F-box [Medicago truncatula] gi|355498097|gb|AES79300.1| F-box
           [Medicago truncatula]
          Length = 402

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 46/130 (35%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
 Frame = +3

Query: 3   KPSMEESMMKISPASFPLEITENILSRLPPIKSLLQYRCVCKTWCNLINSTHFVNLHLTQ 182
           K     S ++ SP   P EI   +LS LP +KSL++ +CVCK+W  +I+++ FV LHL +
Sbjct: 7   KSQQRPSSLESSPIILPDEIITELLSFLP-VKSLMRMKCVCKSWKIIISNSSFVELHLHR 65

Query: 183 SRQNTNVDKLIWNYARLCLFQSTQSSFHLHPTALRVPSPRASLT-FPLDLQTTLETCKIF 359
           S +N  +  +         F S  S  HL    L  PS   +LT  P  L    + C + 
Sbjct: 66  STRNPQLTMVYLPEDTDKAFVSPISLSHL----LESPSKPITLTDDPYYLLNDKDCCSVA 121

Query: 360 GSFGRLLCMY 389
           GS   LLC+Y
Sbjct: 122 GSCNGLLCLY 131


>gb|AFK44336.1| unknown [Lotus japonicus]
          Length = 193

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/89 (40%), Positives = 55/89 (61%)
 Frame = +3

Query: 3   KPSMEESMMKISPASFPLEITENILSRLPPIKSLLQYRCVCKTWCNLINSTHFVNLHLTQ 182
           K S +   M ++    P E+   ILSRLP +KSLL++RCVCK+W  LI+  +F+  HL  
Sbjct: 49  KQSQQNQAMAVA-TFLPDELVVEILSRLP-VKSLLKFRCVCKSWMLLISDPYFIKKHLHL 106

Query: 183 SRQNTNVDKLIWNYARLCLFQSTQSSFHL 269
           S+Q+T     ++N+ R+ L  +T + FHL
Sbjct: 107 SKQST-----LFNHHRIIL-SATTAEFHL 129


>ref|XP_002520898.1| conserved hypothetical protein [Ricinus communis]
           gi|223540029|gb|EEF41607.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 358

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/72 (48%), Positives = 46/72 (63%)
 Frame = +3

Query: 51  PLEITENILSRLPPIKSLLQYRCVCKTWCNLINSTHFVNLHLTQSRQNTNVDKLIWNYAR 230
           P  I ++ILSRL  +KSL++ RCVCKTW NLI+S+ F +LH ++S  N            
Sbjct: 4   PGNIIQDILSRLD-VKSLMRLRCVCKTWFNLISSSSFQDLHRSRSHHNL----------- 51

Query: 231 LCLFQSTQSSFH 266
           L LF+ST SSFH
Sbjct: 52  LFLFRSTSSSFH 63


>ref|XP_003623087.1| F-box protein [Medicago truncatula] gi|355498102|gb|AES79305.1|
           F-box protein [Medicago truncatula]
          Length = 543

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 48/135 (35%), Positives = 67/135 (49%), Gaps = 4/135 (2%)
 Frame = +3

Query: 3   KPSMEESMMKISPASFPLEITENILSRLPPIKSLLQYRCVCKTWCNLINSTHFVNLHLTQ 182
           K     S +  SP   PL++   +LS LP +KSLLQ+RCVC +W  LI+ + FV LHL +
Sbjct: 7   KSQQPPSNVASSPIILPLDLITELLSFLP-VKSLLQFRCVCMSWKILISDSFFVKLHLQR 65

Query: 183 SRQNTNVDKLIWNYARLC---LFQSTQSSFHLHPTALRVPSPRASLTFPLDLQTTLETCK 353
           S QN  +   +   +R C   +  S  S  HL    L  PS   +LT         + C+
Sbjct: 66  SIQNPRL--AVTQESRECSMDVIVSPTSLSHL----LENPSKPTTLTNDPYYSLNDKDCR 119

Query: 354 -IFGSFGRLLCMYHL 395
            + GS   LLC+  L
Sbjct: 120 SVAGSCNGLLCLLGL 134


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 5/128 (3%)
 Frame = +3

Query: 15  EESMMKISPASF-PLEITENILSRLPPIKSLLQYRCVCKTWCNLINSTHFVNLHLTQSRQ 191
           ++ M +  P  F P E+   ILSRLP +KSLLQ+RCVCK+W +LI+  +F+  HL  S +
Sbjct: 37  QQPMSESLPLPFLPDELVVEILSRLP-VKSLLQFRCVCKSWMSLISDPYFMKKHLHLSSR 95

Query: 192 NTNVDKLIWNYARLCLFQSTQSSFHLHPTALRVPSPRASLTFPLDLQTTLET----CKIF 359
            T+     + + R+ L  +T + FHL   +L       S T   DL   ++       I 
Sbjct: 96  CTH-----FTHHRIIL-SATTAEFHLKSCSLSSLFNNPSSTVCDDLNYPVKNKFRHDGIV 149

Query: 360 GSFGRLLC 383
           GS   LLC
Sbjct: 150 GSCNGLLC 157