BLASTX nr result

ID: Coptis23_contig00038676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038676
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305571.1| predicted protein [Populus trichocarpa] gi|2...   138   4e-31
gb|AAY89381.1| starch synthase isoform 3 [Nicotiana langsdorffii...   138   4e-31
ref|XP_003546152.1| PREDICTED: soluble starch synthase 3, chloro...   137   7e-31
ref|NP_001234623.1| starch synthase III [Solanum lycopersicum] g...   136   2e-30
emb|CAB40374.1| Starch synthase isoform SS III [Vigna unguiculata]    136   2e-30

>ref|XP_002305571.1| predicted protein [Populus trichocarpa] gi|222848535|gb|EEE86082.1|
           predicted protein [Populus trichocarpa]
          Length = 1017

 Score =  138 bits (348), Expect = 4e-31
 Identities = 61/75 (81%), Positives = 70/75 (93%)
 Frame = -3

Query: 310 MKKFLLSQKHTVYTEPLDVQAGSTATVLYNPSKTVLNGKPEVWFRCSFNRWTHRRGPLPP 131
           +K+FLLSQKH VYTEPLDVQAGST TV YNP+ T+LNGKPEVWFR SFNRWTHR+GPLPP
Sbjct: 450 LKRFLLSQKHIVYTEPLDVQAGSTVTVFYNPANTILNGKPEVWFRGSFNRWTHRKGPLPP 509

Query: 130 QRMLPANSGSHVKAS 86
           Q+MLPA++GSHVKA+
Sbjct: 510 QKMLPADNGSHVKAT 524


>gb|AAY89381.1| starch synthase isoform 3 [Nicotiana langsdorffii x Nicotiana
           sanderae]
          Length = 266

 Score =  138 bits (348), Expect = 4e-31
 Identities = 61/75 (81%), Positives = 68/75 (90%)
 Frame = -3

Query: 310 MKKFLLSQKHTVYTEPLDVQAGSTATVLYNPSKTVLNGKPEVWFRCSFNRWTHRRGPLPP 131
           MK FLLSQKH VYTEPLDVQAGS+ TV YNP+ TVLNGKPE+WFRCSFNRWTHR GPLPP
Sbjct: 70  MKSFLLSQKHIVYTEPLDVQAGSSVTVYYNPANTVLNGKPEIWFRCSFNRWTHRLGPLPP 129

Query: 130 QRMLPANSGSHVKAS 86
           Q+MLPA +G+HVKA+
Sbjct: 130 QKMLPAENGTHVKAT 144


>ref|XP_003546152.1| PREDICTED: soluble starch synthase 3,
           chloroplastic/amyloplastic-like [Glycine max]
          Length = 1166

 Score =  137 bits (346), Expect = 7e-31
 Identities = 61/75 (81%), Positives = 68/75 (90%)
 Frame = -3

Query: 310 MKKFLLSQKHTVYTEPLDVQAGSTATVLYNPSKTVLNGKPEVWFRCSFNRWTHRRGPLPP 131
           +K+FLLSQKH V+T+PLDVQAGST TV YNPS T LNGKPEVWFRCSFNRW+HR GPLPP
Sbjct: 597 LKRFLLSQKHIVFTDPLDVQAGSTVTVFYNPSNTNLNGKPEVWFRCSFNRWSHRNGPLPP 656

Query: 130 QRMLPANSGSHVKAS 86
           QRMLPA +G+HVKAS
Sbjct: 657 QRMLPAENGTHVKAS 671


>ref|NP_001234623.1| starch synthase III [Solanum lycopersicum]
           gi|247643236|gb|ACT09059.1| starch synthase III
           precursor [Solanum lycopersicum]
          Length = 1230

 Score =  136 bits (343), Expect = 2e-30
 Identities = 59/75 (78%), Positives = 68/75 (90%)
 Frame = -3

Query: 310 MKKFLLSQKHTVYTEPLDVQAGSTATVLYNPSKTVLNGKPEVWFRCSFNRWTHRRGPLPP 131
           MK FLLSQKH VYTEPLD+QAGS+ TV YNP+ TVL+GKPE+WFRCSFNRWTHR GPLPP
Sbjct: 661 MKSFLLSQKHVVYTEPLDIQAGSSVTVYYNPANTVLSGKPEIWFRCSFNRWTHRLGPLPP 720

Query: 130 QRMLPANSGSHVKAS 86
           Q+MLPA +G+HVKA+
Sbjct: 721 QKMLPAENGTHVKAT 735


>emb|CAB40374.1| Starch synthase isoform SS III [Vigna unguiculata]
          Length = 1147

 Score =  136 bits (343), Expect = 2e-30
 Identities = 62/75 (82%), Positives = 67/75 (89%)
 Frame = -3

Query: 310 MKKFLLSQKHTVYTEPLDVQAGSTATVLYNPSKTVLNGKPEVWFRCSFNRWTHRRGPLPP 131
           +KKFLLSQKH VYTEPLD+QAGST TV YNPS T LNG+PEVWFR SFNRW+HR GPLPP
Sbjct: 578 LKKFLLSQKHIVYTEPLDIQAGSTVTVFYNPSNTNLNGRPEVWFRGSFNRWSHRNGPLPP 637

Query: 130 QRMLPANSGSHVKAS 86
           QRMLPA SG+HVKAS
Sbjct: 638 QRMLPAESGTHVKAS 652


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