BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038662
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517205.1| leucine rich repeat-containing protein, puta...   168   4e-40
ref|XP_002314715.1| predicted protein [Populus trichocarpa] gi|2...   164   9e-39
emb|CAM28208.1| Ran GTPase activating protein [Nicotiana bentham...   164   9e-39
emb|CAL69643.1| Ran GTPase-activating protein 1 [Solanum tuberosum]   164   9e-39
gb|ABQ51814.1| RAN GTPase-activating protein 1 [Nicotiana bentha...   164   9e-39

>ref|XP_002517205.1| leucine rich repeat-containing protein, putative [Ricinus communis]
           gi|223543840|gb|EEF45368.1| leucine rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 549

 Score =  168 bits (426), Expect = 4e-40
 Identities = 83/131 (63%), Positives = 104/131 (79%)
 Frame = -2

Query: 393 KVLHFHNNRTARNGAIAISELIKRSPALEDFRCTSTRAGPEGGLPLIQALKTCSNLKKLD 214
           ++LHFHNN T   GA+AI+E++KRS  LEDFRC+STR G EGG+ L +AL+TCS+LKKLD
Sbjct: 283 RILHFHNNMTGDPGALAIAEVLKRSALLEDFRCSSTRIGAEGGIALSEALETCSHLKKLD 342

Query: 213 IKDNRFGVEAAVALSNTLSSHLCLVEIYLSYMNFGNVGSIAIANALAKYAPLLEVLDLAK 34
           ++DN FGVEA VALS  L  H  L E+YLSY+N  + G+IAIANAL + AP LEVLD+A 
Sbjct: 343 LRDNVFGVEAGVALSKVLPKHAGLTEVYLSYLNLEDEGAIAIANALKESAPALEVLDMAG 402

Query: 33  NEITAEAAPAL 1
           N+ITAEAAP +
Sbjct: 403 NDITAEAAPVV 413


>ref|XP_002314715.1| predicted protein [Populus trichocarpa] gi|222863755|gb|EEF00886.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  164 bits (414), Expect = 9e-39
 Identities = 81/129 (62%), Positives = 102/129 (79%)
 Frame = -2

Query: 393 KVLHFHNNRTARNGAIAISELIKRSPALEDFRCTSTRAGPEGGLPLIQALKTCSNLKKLD 214
           +VL FHNN T   GA+AIS+++KRSP LEDFRC+STR G EGG+ L +AL TC++LKKLD
Sbjct: 274 RVLQFHNNMTGDKGALAISKVVKRSPLLEDFRCSSTRVGSEGGVALSEALDTCTHLKKLD 333

Query: 213 IKDNRFGVEAAVALSNTLSSHLCLVEIYLSYMNFGNVGSIAIANALAKYAPLLEVLDLAK 34
           ++DN FGVEA VALS  LS +  L E+YLSY+N  + G++AIA AL + AP LEVLD+A 
Sbjct: 334 LRDNMFGVEAGVALSKALSKYAGLTEVYLSYLNLEDEGAMAIARALKESAPSLEVLDIAG 393

Query: 33  NEITAEAAP 7
           N+ITAEAAP
Sbjct: 394 NDITAEAAP 402


>emb|CAM28208.1| Ran GTPase activating protein [Nicotiana benthamiana]
          Length = 534

 Score =  164 bits (414), Expect = 9e-39
 Identities = 83/131 (63%), Positives = 99/131 (75%)
 Frame = -2

Query: 393 KVLHFHNNRTARNGAIAISELIKRSPALEDFRCTSTRAGPEGGLPLIQALKTCSNLKKLD 214
           ++LHFHNN T   GA+AISEL+K SPALEDFRC+STR G EGG+ L QAL  C NLKKLD
Sbjct: 268 RILHFHNNMTGDEGALAISELVKHSPALEDFRCSSTRVGSEGGVALSQALGECRNLKKLD 327

Query: 213 IKDNRFGVEAAVALSNTLSSHLCLVEIYLSYMNFGNVGSIAIANALAKYAPLLEVLDLAK 34
           ++DN FGVEA +ALS  LS    L EIYLSY+N  + GSIA+ANAL   AP LEVL++  
Sbjct: 328 LRDNMFGVEAGIALSKVLSIFSDLTEIYLSYLNLEDEGSIALANALKGSAPSLEVLEMDG 387

Query: 33  NEITAEAAPAL 1
           N+IT +AAP L
Sbjct: 388 NDITVKAAPVL 398


>emb|CAL69643.1| Ran GTPase-activating protein 1 [Solanum tuberosum]
          Length = 534

 Score =  164 bits (414), Expect = 9e-39
 Identities = 82/131 (62%), Positives = 101/131 (77%)
 Frame = -2

Query: 393 KVLHFHNNRTARNGAIAISELIKRSPALEDFRCTSTRAGPEGGLPLIQALKTCSNLKKLD 214
           ++LHFHNN T   GA+AIS+L+K SPALEDFRC+STR G EGG+ L QAL  C NLKK+D
Sbjct: 268 RILHFHNNMTGDEGALAISKLVKHSPALEDFRCSSTRVGSEGGVALSQALGECRNLKKVD 327

Query: 213 IKDNRFGVEAAVALSNTLSSHLCLVEIYLSYMNFGNVGSIAIANALAKYAPLLEVLDLAK 34
           ++DN FGVEA +ALS  LS    L EIYLSY+N  + GSIA+AN L + AP LEVL++  
Sbjct: 328 LRDNMFGVEAGIALSKVLSIFSGLTEIYLSYLNLEDEGSIALANVLKESAPSLEVLEMDG 387

Query: 33  NEITAEAAPAL 1
           N+ITA+AAPAL
Sbjct: 388 NDITAKAAPAL 398


>gb|ABQ51814.1| RAN GTPase-activating protein 1 [Nicotiana benthamiana]
          Length = 534

 Score =  164 bits (414), Expect = 9e-39
 Identities = 83/131 (63%), Positives = 99/131 (75%)
 Frame = -2

Query: 393 KVLHFHNNRTARNGAIAISELIKRSPALEDFRCTSTRAGPEGGLPLIQALKTCSNLKKLD 214
           ++LHFHNN T   GA+AISEL+K SPALEDFRC+STR G EGG+ L QAL  C NLKKLD
Sbjct: 268 RILHFHNNMTGDEGALAISELVKHSPALEDFRCSSTRVGSEGGVALSQALGECRNLKKLD 327

Query: 213 IKDNRFGVEAAVALSNTLSSHLCLVEIYLSYMNFGNVGSIAIANALAKYAPLLEVLDLAK 34
           ++DN FGVEA +ALS  LS    L EIYLSY+N  + GSIA+ANAL   AP LEVL++  
Sbjct: 328 LRDNMFGVEAGIALSKVLSIFSDLTEIYLSYLNLEDEGSIALANALKGSAPSLEVLEMDG 387

Query: 33  NEITAEAAPAL 1
           N+IT +AAP L
Sbjct: 388 NDITVKAAPVL 398