BLASTX nr result

ID: Coptis23_contig00038659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038659
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36884.3| unnamed protein product [Vitis vinifera]              246   1e-63
ref|XP_002271736.1| PREDICTED: endoglucanase 17 [Vitis vinifera]      246   1e-63
gb|AEO97200.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|...   243   9e-63
ref|XP_002301487.1| glycosyl hydrolase family 9 [Populus trichoc...   243   9e-63
ref|XP_002523114.1| endo-1,4-beta-glucanase, putative [Ricinus c...   240   8e-62

>emb|CBI36884.3| unnamed protein product [Vitis vinifera]
          Length = 439

 Score =  246 bits (628), Expect = 1e-63
 Identities = 118/133 (88%), Positives = 123/133 (92%)
 Frame = -2

Query: 399 KGHADTFICSLIPGASFSQAQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAHKVV 220
           KGHAD FICSL+PG  FSQAQYTPGGLLFKMSDSNMQYVTSTSFLL+TYAKYLTSAHKVV
Sbjct: 251 KGHADNFICSLVPGTPFSQAQYTPGGLLFKMSDSNMQYVTSTSFLLVTYAKYLTSAHKVV 310

Query: 219 TCGGNIITPKRLRNIAKKQVDYLLGDNPLKMSYMVGYGSRYPQRIHHRGSSLPSVAAHPA 40
            CGG IITPKRLR IAKKQVDYLLGDNPLKMSYMVGYG RYPQRIHHRGSSLPS+A HPA
Sbjct: 311 NCGGTIITPKRLRVIAKKQVDYLLGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSIAKHPA 370

Query: 39  KIQCSSGFSAMSS 1
           KIQCS+GF+ M S
Sbjct: 371 KIQCSAGFNIMHS 383


>ref|XP_002271736.1| PREDICTED: endoglucanase 17 [Vitis vinifera]
          Length = 511

 Score =  246 bits (628), Expect = 1e-63
 Identities = 118/133 (88%), Positives = 123/133 (92%)
 Frame = -2

Query: 399 KGHADTFICSLIPGASFSQAQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAHKVV 220
           KGHAD FICSL+PG  FSQAQYTPGGLLFKMSDSNMQYVTSTSFLL+TYAKYLTSAHKVV
Sbjct: 323 KGHADNFICSLVPGTPFSQAQYTPGGLLFKMSDSNMQYVTSTSFLLVTYAKYLTSAHKVV 382

Query: 219 TCGGNIITPKRLRNIAKKQVDYLLGDNPLKMSYMVGYGSRYPQRIHHRGSSLPSVAAHPA 40
            CGG IITPKRLR IAKKQVDYLLGDNPLKMSYMVGYG RYPQRIHHRGSSLPS+A HPA
Sbjct: 383 NCGGTIITPKRLRVIAKKQVDYLLGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSIAKHPA 442

Query: 39  KIQCSSGFSAMSS 1
           KIQCS+GF+ M S
Sbjct: 443 KIQCSAGFNIMHS 455


>gb|AEO97200.1| endo-1,4-beta-glucanase [Populus trichocarpa]
           gi|347466629|gb|AEO97227.1| endo-1,4-beta-glucanase
           [Populus trichocarpa]
          Length = 489

 Score =  243 bits (621), Expect = 9e-63
 Identities = 116/133 (87%), Positives = 121/133 (90%)
 Frame = -2

Query: 399 KGHADTFICSLIPGASFSQAQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAHKVV 220
           KGHAD FICSLIPGA FS AQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSA  VV
Sbjct: 292 KGHADNFICSLIPGAPFSSAQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSARTVV 351

Query: 219 TCGGNIITPKRLRNIAKKQVDYLLGDNPLKMSYMVGYGSRYPQRIHHRGSSLPSVAAHPA 40
            CGG ++TPKRLR IAKKQVDYLLGDNPLKMSYMVGYG RYPQRIHHRGSSLPS+A HP 
Sbjct: 352 NCGGTVVTPKRLRTIAKKQVDYLLGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSIATHPG 411

Query: 39  KIQCSSGFSAMSS 1
           KIQC+SGFS M+S
Sbjct: 412 KIQCTSGFSVMNS 424


>ref|XP_002301487.1| glycosyl hydrolase family 9 [Populus trichocarpa]
           gi|222843213|gb|EEE80760.1| glycosyl hydrolase family 9
           [Populus trichocarpa]
          Length = 520

 Score =  243 bits (621), Expect = 9e-63
 Identities = 116/133 (87%), Positives = 121/133 (90%)
 Frame = -2

Query: 399 KGHADTFICSLIPGASFSQAQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAHKVV 220
           KGHAD FICSLIPGA FS AQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSA  VV
Sbjct: 323 KGHADNFICSLIPGAPFSSAQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSARTVV 382

Query: 219 TCGGNIITPKRLRNIAKKQVDYLLGDNPLKMSYMVGYGSRYPQRIHHRGSSLPSVAAHPA 40
            CGG ++TPKRLR IAKKQVDYLLGDNPLKMSYMVGYG RYPQRIHHRGSSLPS+A HP 
Sbjct: 383 NCGGTVVTPKRLRTIAKKQVDYLLGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSIATHPG 442

Query: 39  KIQCSSGFSAMSS 1
           KIQC+SGFS M+S
Sbjct: 443 KIQCTSGFSVMNS 455


>ref|XP_002523114.1| endo-1,4-beta-glucanase, putative [Ricinus communis]
           gi|223537676|gb|EEF39299.1| endo-1,4-beta-glucanase,
           putative [Ricinus communis]
          Length = 510

 Score =  240 bits (613), Expect = 8e-62
 Identities = 114/133 (85%), Positives = 120/133 (90%)
 Frame = -2

Query: 399 KGHADTFICSLIPGASFSQAQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAHKVV 220
           K HAD FICS+IPGA FS AQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYL  AHKVV
Sbjct: 322 KDHADNFICSIIPGAPFSSAQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLIQAHKVV 381

Query: 219 TCGGNIITPKRLRNIAKKQVDYLLGDNPLKMSYMVGYGSRYPQRIHHRGSSLPSVAAHPA 40
            CGG ++ P RLRNIAKKQVDYLLGDNPLKMSYMVGYG RYPQRIHHRGSSLPS++ HPA
Sbjct: 382 NCGGTVVGPNRLRNIAKKQVDYLLGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSISVHPA 441

Query: 39  KIQCSSGFSAMSS 1
           KIQCSSGFS M+S
Sbjct: 442 KIQCSSGFSIMNS 454


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