BLASTX nr result

ID: Coptis23_contig00038646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038646
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002986312.1| hypothetical protein SELMODRAFT_123864 [Sela...    60   2e-07
ref|XP_001783312.1| predicted protein [Physcomitrella patens sub...    57   2e-06
ref|XP_002987196.1| hypothetical protein SELMODRAFT_446854 [Sela...    55   8e-06

>ref|XP_002986312.1| hypothetical protein SELMODRAFT_123864 [Selaginella moellendorffii]
           gi|302814111|ref|XP_002988740.1| hypothetical protein
           SELMODRAFT_128630 [Selaginella moellendorffii]
           gi|300143561|gb|EFJ10251.1| hypothetical protein
           SELMODRAFT_128630 [Selaginella moellendorffii]
           gi|300145848|gb|EFJ12521.1| hypothetical protein
           SELMODRAFT_123864 [Selaginella moellendorffii]
          Length = 381

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 25/62 (40%), Positives = 41/62 (66%)
 Frame = +3

Query: 105 STTNQFNELPEELTERIFARLPISAVFNLRRVCKSWEKQLTSKSYLRLWNEICNRDLWFL 284
           S+ ++F+ LP++L E+IFA LP+ ++F  R VCK W    TSKS++ L  ++     W+L
Sbjct: 20  SSDDEFSSLPDDLLEKIFAALPLLSLFRARAVCKRWHGITTSKSFMALCAQVTTHKPWYL 79

Query: 285 VY 290
           +Y
Sbjct: 80  MY 81


>ref|XP_001783312.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162665164|gb|EDQ51857.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 861

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
 Frame = +3

Query: 129 LPEELTERIFARLPISAVFNLRRVCKSWEKQLTSKSYLRLWNEICNRDLW-FLVY--HTN 299
           LPE+L +R  A LP+ + F  R VCK W   L + S+L LW+++ ++ LW F +Y  H  
Sbjct: 388 LPEDLIDRTLACLPVPSFFRFRSVCKRWNTLLKTNSFLELWSDVVSQQLWLFSIYAKHPT 447

Query: 300 RMIA 311
            M+A
Sbjct: 448 EMVA 451


>ref|XP_002987196.1| hypothetical protein SELMODRAFT_446854 [Selaginella moellendorffii]
           gi|300145093|gb|EFJ11772.1| hypothetical protein
           SELMODRAFT_446854 [Selaginella moellendorffii]
          Length = 863

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 22/58 (37%), Positives = 39/58 (67%)
 Frame = +3

Query: 120 FNELPEELTERIFARLPISAVFNLRRVCKSWEKQLTSKSYLRLWNEICNRDLWFLVYH 293
           +++LPE++T  I ARLP+  +  +R VCK WE  + S  +L+L +++ +R  W+L +H
Sbjct: 443 WSQLPEDMTRIILARLPLPNLLQVRTVCKKWEATIRSPPFLKLCSDLPSRAPWYLGFH 500


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