BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038632
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH66143.1| OSIGBa0114M03.1 [Oryza sativa Indica Group]            72   4e-23
gb|ABA93571.1| retrotransposon protein, putative, Ty3-gypsy subc...    72   4e-23
emb|CAD40451.2| OSJNBa0041M21.9 [Oryza sativa Japonica Group] gi...    71   9e-23
emb|CAH66267.1| OSIGBa0136B09.3 [Oryza sativa Indica Group]            71   9e-23
gb|AAM14679.1|AC097446_8 Putative polyprotein [Oryza sativa Japo...    71   9e-23

>emb|CAH66143.1| OSIGBa0114M03.1 [Oryza sativa Indica Group]
          Length = 1571

 Score = 72.4 bits (176), Expect(2) = 4e-23
 Identities = 31/51 (60%), Positives = 41/51 (80%)
 Frame = +3

Query: 144  LCKHQLYGNFSRCEFWFSKVKFLGHVISAAGISVDPSKIGALLN*PKPRSV 296
            L KHQLY  FS+CEFW S+VKFLGHVISA G++VDPS + ++ N  +P++V
Sbjct: 906  LRKHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTV 956



 Score = 60.5 bits (145), Expect(2) = 4e-23
 Identities = 31/46 (67%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
 Frame = +2

Query: 2   APAAFMDLMH*VFWTHLNQYVFVFIDNILIYSRTQEEH-EHLRVAL 136
           APA FM+LM+ VF  +L+++V VFID+ILIYSRT+EEH EHLR+AL
Sbjct: 858 APAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRTREEHEEHLRLAL 903


>gb|ABA93571.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1383

 Score = 72.4 bits (176), Expect(2) = 4e-23
 Identities = 31/51 (60%), Positives = 41/51 (80%)
 Frame = +3

Query: 144 LCKHQLYGNFSRCEFWFSKVKFLGHVISAAGISVDPSKIGALLN*PKPRSV 296
           L +HQLY  FS+CEFW SKVKFLGHVISA G++VDPS + ++ N  +P++V
Sbjct: 714 LREHQLYAKFSKCEFWLSKVKFLGHVISAGGVAVDPSNVESVTNWKQPKTV 764



 Score = 60.5 bits (145), Expect(2) = 4e-23
 Identities = 31/46 (67%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
 Frame = +2

Query: 2   APAAFMDLMH*VFWTHLNQYVFVFIDNILIYSRTQEEH-EHLRVAL 136
           APA FM+LM+ VF  +L+++V VFID+ILIYSRT+EEH EHLR+AL
Sbjct: 666 APAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLAL 711


>emb|CAD40451.2| OSJNBa0041M21.9 [Oryza sativa Japonica Group]
           gi|38343993|emb|CAD40358.2| OSJNBa0093P23.4 [Oryza
           sativa Japonica Group]
          Length = 1543

 Score = 71.2 bits (173), Expect(2) = 9e-23
 Identities = 30/51 (58%), Positives = 41/51 (80%)
 Frame = +3

Query: 144 LCKHQLYGNFSRCEFWFSKVKFLGHVISAAGISVDPSKIGALLN*PKPRSV 296
           L +HQLY  FS+CEFW S+VKFLGHVISA G++VDPS + ++ N  +P++V
Sbjct: 787 LREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESITNWKQPKTV 837



 Score = 60.5 bits (145), Expect(2) = 9e-23
 Identities = 31/46 (67%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
 Frame = +2

Query: 2   APAAFMDLMH*VFWTHLNQYVFVFIDNILIYSRTQEEH-EHLRVAL 136
           APA FM+LM+ VF  +L+++V VFID+ILIYSRT+EEH EHLR+AL
Sbjct: 739 APAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLAL 784


>emb|CAH66267.1| OSIGBa0136B09.3 [Oryza sativa Indica Group]
          Length = 1469

 Score = 71.2 bits (173), Expect(2) = 9e-23
 Identities = 30/51 (58%), Positives = 41/51 (80%)
 Frame = +3

Query: 144 LCKHQLYGNFSRCEFWFSKVKFLGHVISAAGISVDPSKIGALLN*PKPRSV 296
           L +HQLY  FS+CEFW S+VKFLGHVISA G++VDPS + ++ N  +P++V
Sbjct: 713 LREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESITNWKQPKTV 763



 Score = 60.5 bits (145), Expect(2) = 9e-23
 Identities = 31/46 (67%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
 Frame = +2

Query: 2   APAAFMDLMH*VFWTHLNQYVFVFIDNILIYSRTQEEH-EHLRVAL 136
           APA FM+LM+ VF  +L+++V VFID+ILIYSRT+EEH EHLR+AL
Sbjct: 665 APAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLAL 710


>gb|AAM14679.1|AC097446_8 Putative polyprotein [Oryza sativa Japonica Group]
           gi|22725919|gb|AAN04929.1| Putative polyprotein [Oryza
           sativa Japonica Group] gi|31430223|gb|AAP52169.1|
           retrotransposon protein, putative, Ty3-gypsy subclass
           [Oryza sativa Japonica Group]
          Length = 1022

 Score = 71.2 bits (173), Expect(2) = 9e-23
 Identities = 30/51 (58%), Positives = 41/51 (80%)
 Frame = +3

Query: 144 LCKHQLYGNFSRCEFWFSKVKFLGHVISAAGISVDPSKIGALLN*PKPRSV 296
           L +HQLY  FS+CEFW S+VKFLGHVISA G++VDPS + ++ N  +P++V
Sbjct: 262 LREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESITNWKQPKTV 312



 Score = 60.5 bits (145), Expect(2) = 9e-23
 Identities = 31/46 (67%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
 Frame = +2

Query: 2   APAAFMDLMH*VFWTHLNQYVFVFIDNILIYSRTQEEH-EHLRVAL 136
           APA FM+LM+ VF  +L+++V VFID+ILIYSRT+EEH EHLR+AL
Sbjct: 214 APAFFMNLMNMVFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLAL 259