BLASTX nr result

ID: Coptis23_contig00038625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038625
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65659.1| hypothetical protein VITISV_000953 [Vitis vinifera]   122   3e-26
emb|CBI34668.3| unnamed protein product [Vitis vinifera]              121   5e-26
ref|XP_002274169.1| PREDICTED: uncharacterized protein LOC100256...   121   5e-26
ref|XP_002276223.1| PREDICTED: kinesin-4-like [Vitis vinifera]        108   4e-22
ref|XP_002509807.1| kinesin heavy chain, putative [Ricinus commu...   108   6e-22

>emb|CAN65659.1| hypothetical protein VITISV_000953 [Vitis vinifera]
          Length = 1742

 Score =  122 bits (306), Expect = 3e-26
 Identities = 64/113 (56%), Positives = 84/113 (74%), Gaps = 1/113 (0%)
 Frame = +3

Query: 12  GSVVG-AKQRAELVEWLNDIVPNLSLPVEASDEEVRSCLLDGSVFCSILSRLNPTRPEED 188
           G++ G   QR +LVEWLN I+P LSLP+EAS+E++R+CL+DG+V C IL+RL+P   E  
Sbjct: 24  GTIEGNXSQRTQLVEWLNGILPYLSLPLEASEEDLRACLIDGTVLCGILNRLSPGSIEMG 83

Query: 189 GTCDNSSESRLCTVKSFLAAVLEMGLPKFEASDLEQGSMTKILECLWTVKAQF 347
           G     SES L  +K FLAA+ EMGLP+FE SDLEQGSM  +L+CL T++A F
Sbjct: 84  GI----SESHLENLKRFLAAMEEMGLPRFELSDLEQGSMDAVLQCLQTLRAHF 132


>emb|CBI34668.3| unnamed protein product [Vitis vinifera]
          Length = 1071

 Score =  121 bits (304), Expect = 5e-26
 Identities = 64/113 (56%), Positives = 84/113 (74%), Gaps = 1/113 (0%)
 Frame = +3

Query: 12  GSVVG-AKQRAELVEWLNDIVPNLSLPVEASDEEVRSCLLDGSVFCSILSRLNPTRPEED 188
           G++ G   QR +LVEWLN I+P LSLP+EAS+E++R+CL+DG+V C IL+RL+P   E  
Sbjct: 35  GTIEGNLSQRTQLVEWLNGILPYLSLPLEASEEDLRACLIDGTVLCGILNRLSPGSIEMG 94

Query: 189 GTCDNSSESRLCTVKSFLAAVLEMGLPKFEASDLEQGSMTKILECLWTVKAQF 347
           G     SES L  +K FLAA+ EMGLP+FE SDLEQGSM  +L+CL T++A F
Sbjct: 95  GI----SESYLENLKRFLAAMEEMGLPRFELSDLEQGSMDAVLQCLQTLRAHF 143


>ref|XP_002274169.1| PREDICTED: uncharacterized protein LOC100256435 [Vitis vinifera]
          Length = 1101

 Score =  121 bits (304), Expect = 5e-26
 Identities = 64/113 (56%), Positives = 84/113 (74%), Gaps = 1/113 (0%)
 Frame = +3

Query: 12  GSVVG-AKQRAELVEWLNDIVPNLSLPVEASDEEVRSCLLDGSVFCSILSRLNPTRPEED 188
           G++ G   QR +LVEWLN I+P LSLP+EAS+E++R+CL+DG+V C IL+RL+P   E  
Sbjct: 35  GTIEGNLSQRTQLVEWLNGILPYLSLPLEASEEDLRACLIDGTVLCGILNRLSPGSIEMG 94

Query: 189 GTCDNSSESRLCTVKSFLAAVLEMGLPKFEASDLEQGSMTKILECLWTVKAQF 347
           G     SES L  +K FLAA+ EMGLP+FE SDLEQGSM  +L+CL T++A F
Sbjct: 95  GI----SESYLENLKRFLAAMEEMGLPRFELSDLEQGSMDAVLQCLQTLRAHF 143


>ref|XP_002276223.1| PREDICTED: kinesin-4-like [Vitis vinifera]
          Length = 1088

 Score =  108 bits (271), Expect = 4e-22
 Identities = 54/104 (51%), Positives = 74/104 (71%)
 Frame = +3

Query: 30  KQRAELVEWLNDIVPNLSLPVEASDEEVRSCLLDGSVFCSILSRLNPTRPEEDGTCDNSS 209
           K+RA + EWLN ++PNL+LPV+AS EE+R+CL+DG+V C  L+RL P    E    D+SS
Sbjct: 40  KKRAIVAEWLNSMLPNLNLPVKASVEELRACLIDGAVLCRFLNRLRPGSVSEVRDYDHSS 99

Query: 210 ESRLCTVKSFLAAVLEMGLPKFEASDLEQGSMTKILECLWTVKA 341
             R   VK FL A+  +G+P FE +DLE+GSM  +LEC+ T+KA
Sbjct: 100 GMRYENVKKFLEALDALGMPGFEIADLEKGSMKTVLECILTLKA 143


>ref|XP_002509807.1| kinesin heavy chain, putative [Ricinus communis]
           gi|223549706|gb|EEF51194.1| kinesin heavy chain,
           putative [Ricinus communis]
          Length = 1069

 Score =  108 bits (269), Expect = 6e-22
 Identities = 56/114 (49%), Positives = 80/114 (70%)
 Frame = +3

Query: 6   PVGSVVGAKQRAELVEWLNDIVPNLSLPVEASDEEVRSCLLDGSVFCSILSRLNPTRPEE 185
           P G + G  Q   LVEWLN ++P+L+LP+EAS+EE+R+CL+DG+V CSIL++L+P   E 
Sbjct: 32  PEGILDGNLQ--SLVEWLNHMIPHLNLPLEASEEELRACLIDGTVLCSILNKLSPGLIEM 89

Query: 186 DGTCDNSSESRLCTVKSFLAAVLEMGLPKFEASDLEQGSMTKILECLWTVKAQF 347
            G  +   E     +K FLAA+ EMGLP+F  +D++QG M  +L+CL T+KA F
Sbjct: 90  RGNIEPGPEK----IKMFLAAMDEMGLPRFVIADIQQGYMLPVLQCLGTLKAHF 139


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