BLASTX nr result

ID: Coptis23_contig00038607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038607
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509542.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
ref|XP_002298612.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002303846.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_002303850.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002269911.2| PREDICTED: UPF0481 protein At3g47200-like [V...    63   2e-08

>ref|XP_002509542.1| conserved hypothetical protein [Ricinus communis]
           gi|223549441|gb|EEF50929.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 431

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 50/140 (35%), Positives = 72/140 (51%), Gaps = 4/140 (2%)
 Frame = -1

Query: 408 LILLENQLPFSVLKDLFDLTSDPKHN-ESLSDLVVNFLDPEIQTYGIPRNDE---LTGKH 241
           LILLENQ+P+ VL  LF++T +   N E L  L + F      +   P  D       KH
Sbjct: 173 LILLENQIPWLVLDCLFEMTKEENGNSEPLVQLAIEFFANMFSSAPSPVYDPNLLAKSKH 232

Query: 240 LLDLVRNHLLGKSPQKNYGKYPNWKLTRYCAADLKNAGVVFKKNENAKSLLDITFNDEDG 61
           +LDL+RN L+         +   W+     A ++K +G++FKK+E+AKS+LDI F  + G
Sbjct: 233 ILDLLRNWLIAPIYPTQSNEVSEWQPFP-SATEIKESGILFKKHEDAKSILDIRF--DKG 289

Query: 60  NLIIPPFFFGEGMIVYLQNL 1
            L IP     E      +NL
Sbjct: 290 ILEIPNLLIQETTETIFRNL 309


>ref|XP_002298612.1| predicted protein [Populus trichocarpa] gi|222845870|gb|EEE83417.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 53/141 (37%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
 Frame = -1

Query: 408 LILLENQLPFSVLKDLFDLTSDPKHNESLSDLVVNFLDPEIQTYGIPRNDEL--TGKHLL 235
           LIL+ENQ+P+ VL+ LF++T+DP +  +L+ L + F    I ++  P  D      KHLL
Sbjct: 183 LILVENQIPWLVLEHLFNMTADPGNATTLAQLALQFF-RNIFSFHPPSIDPYYQGQKHLL 241

Query: 234 DLVRNHLL---GKSPQKNYGKYPNWKLTRYCAADLKNAGVVFKKNENAKSLLDITFNDED 64
           DL+RN L+   G+      G  P   +T     +L +AG+  K  E ++S+LDI F  E+
Sbjct: 242 DLLRNWLVLSSGEEEDSETGWEPMPSVT-----NLVDAGIKLKVGE-SRSILDIKF--EN 293

Query: 63  GNLIIPPFFFGEGMIVYLQNL 1
           G L IPP    E   V ++NL
Sbjct: 294 GFLEIPPLLVQETTEVIIRNL 314


>ref|XP_002303846.1| predicted protein [Populus trichocarpa] gi|222841278|gb|EEE78825.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 3/128 (2%)
 Frame = -1

Query: 408 LILLENQLPFSVLKDLFDLTSDPKHNESLSDLVVNF---LDPEIQTYGIPRNDELTGKHL 238
           + LLENQLPFSVL +LF +TS+ + NE    + ++F   + P    + IP N   T KHL
Sbjct: 135 MFLLENQLPFSVLWELFTMTSEVQ-NEDFFGMALSFCQRIFPGSGNHSIPEN--YTCKHL 191

Query: 237 LDLVRNHLLGKSPQKNYGKYPNWKLTRYCAADLKNAGVVFKKNENAKSLLDITFNDEDGN 58
           LD++  H+  ++P        N +     A +L+ AG+ FKK E +  L D+ F  E+G 
Sbjct: 192 LDIL-YHIGYQTPDSTESPKDNDRYFIRNAKELQEAGIKFKKREGSGRLFDVVFL-ENGT 249

Query: 57  LIIPPFFF 34
           +    FFF
Sbjct: 250 IKTDFFFF 257


>ref|XP_002303850.1| predicted protein [Populus trichocarpa] gi|222841282|gb|EEE78829.1|
           predicted protein [Populus trichocarpa]
          Length = 332

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 47/125 (37%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
 Frame = -1

Query: 408 LILLENQLPFSVLKDLFDLTSDPKHNESLSDLVVNF---LDPEIQTYGIPRNDELTGKHL 238
           + LLENQLPFSVL +LF +TS+ + NE    + ++F   + P    + IP N   T KHL
Sbjct: 68  MFLLENQLPFSVLWELFTMTSEVQ-NEDFFGMALSFCQRIFPGSGNHSIPEN--YTCKHL 124

Query: 237 LDLVRNHLLGKSPQKNYGKYPN-WKLTRYCAADLKNAGVVFKKNENAKSLLDITFNDEDG 61
           LD++  H+  ++P        N W   R  A +L+ +G+ FKK E ++ L D+ F  E+G
Sbjct: 125 LDIL-YHIGYQTPDSTEPPKDNDWYFIRN-AKELQESGIKFKKREGSRRLFDVVFL-ENG 181

Query: 60  NLIIP 46
            + IP
Sbjct: 182 TIEIP 186


>ref|XP_002269911.2| PREDICTED: UPF0481 protein At3g47200-like [Vitis vinifera]
          Length = 498

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 53/155 (34%), Positives = 73/155 (47%), Gaps = 19/155 (12%)
 Frame = -1

Query: 408 LILLENQLPFSVLKDLFD---LTSDPKHNESLSDLVVNFLDPEIQTYGI--PRNDELTGK 244
           L+ LENQLPF VL+ L++   L  DP     L DLVV F DP +    I    N      
Sbjct: 217 LLKLENQLPFFVLEKLYELIRLVDDP----PLVDLVVTFFDPLLPRKNIKGKLNPNEEFD 272

Query: 243 HLLDLVRNHLLGKSPQKNYGKYPNWKLTR--------------YCAADLKNAGVVFKKNE 106
           H+LD+ R+  L    ++   K   WK  +              +C  +L+ AGV FK  E
Sbjct: 273 HMLDVFRSTFLSSINERT--KPAGWKQLQKLDNIPLVEERQLIHCVTELQEAGVRFKMRE 330

Query: 105 NAKSLLDITFNDEDGNLIIPPFFFGEGMIVYLQNL 1
           +   LLDI+F  +DG L IPP +  +  +    NL
Sbjct: 331 DL-DLLDISF--KDGMLKIPPLYIDDNTVPLFLNL 362


Top