BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038590
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637502.1| F-box protein [Medicago truncatula] gi|35550...    76   3e-12
ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm...    67   1e-09
gb|ADM53763.1| S-locus F-box brothers [Malus x domestica]              67   1e-09
dbj|BAJ11962.1| MdFBX14 [Malus x domestica]                            67   1e-09
ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|35548...    67   2e-09

>ref|XP_003637502.1| F-box protein [Medicago truncatula] gi|355503437|gb|AES84640.1|
           F-box protein [Medicago truncatula]
          Length = 312

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
 Frame = +3

Query: 12  LTEAIEVNFPFKSSKTVVDYYGSCNGLVCLDVNSNIVMWNPSTKEFK---KLPLSCEVFS 182
           LT  I++N PFK     +  +GSCNGL+C+ +N  I  WNP+ ++ +    LP+     S
Sbjct: 70  LTTRIKLNLPFKIPNNFISLFGSCNGLLCISINVGIAFWNPNIRKHRIIPNLPIQTPALS 129

Query: 183 KRAKGSVATLLSGFGYDPSLDDYKVVKAMQYSN 281
           K     V   + GFG+DP  DDYK+ +++  SN
Sbjct: 130 KPNTIHVGFCVHGFGFDPLTDDYKLSESLVSSN 162


>ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis]
           gi|223533120|gb|EEF34878.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 379

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
 Frame = +3

Query: 3   DTLLTEAIEVNFPFKSSKTVVDYYGSCNGLVCLDVN-----SNIVMWNPSTKEFKKLPLS 167
           D + +E  E++FP +SS    +  GSCNG++CL  N       IV+WNPS      LPL 
Sbjct: 79  DDMFSEYQELDFPLESSWDYFEIVGSCNGIICLTDNHSHILKRIVLWNPSIGLSVTLPL- 137

Query: 168 CEVFSKRAKGSVATLLSGFGYDPSLDDYKVVKAMQYSNGNE 290
                +R    V+ ++ GFG+D   +DYKV++ + YS  ++
Sbjct: 138 -----QRISYKVSNVVLGFGFDSRTNDYKVIRIVYYSTNDD 173


>gb|ADM53763.1| S-locus F-box brothers [Malus x domestica]
          Length = 408

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
 Frame = +3

Query: 18  EAIEVNFPFKSSKTVVDYYGSCNGLVCLDVNSNIVMWNPSTKEFKKLPLSCEVFSKRAKG 197
           E + + FP +    +V  +G CNG+VCL V  + V++NP+T+E K+LP SC +     KG
Sbjct: 104 EDLNIQFPLEDHD-LVSVHGYCNGIVCLIVGKHAVLYNPATRELKQLPDSCLLLPSPPKG 162

Query: 198 SVATLLS----GFGYDPSLDDYKVVKAMQ 272
                 S    GFGYD    +YKVVK ++
Sbjct: 163 KFELESSFQGMGFGYDSKAKEYKVVKIIE 191


>dbj|BAJ11962.1| MdFBX14 [Malus x domestica]
          Length = 424

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
 Frame = +3

Query: 18  EAIEVNFPFKSSKTVVDYYGSCNGLVCLDVNSNIVMWNPSTKEFKKLPLSCEVFSKRAKG 197
           E + + FP +    +V  +G CNG+VCL V  + V++NP+T+E K+LP SC +     KG
Sbjct: 120 EDLNIQFPLEDHD-LVSVHGYCNGIVCLIVGKHAVLYNPATRELKQLPDSCLLLPSPPKG 178

Query: 198 SVATLLS----GFGYDPSLDDYKVVKAMQ 272
                 S    GFGYD    +YKVVK ++
Sbjct: 179 KFELESSFQGMGFGYDSKAKEYKVVKIIE 207


>ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|355487558|gb|AES68761.1|
           F-box protein [Medicago truncatula]
          Length = 382

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
 Frame = +3

Query: 69  YYGSCNGLVCLDVN---SNIVMWNPSTKEFKKLPLSCEVFSKRAKGSVATLLSGFGYDPS 239
           + GSCNG+VC+  N   S ++ WNPST++FK+LPL    F K   G V  +  GFGYD S
Sbjct: 121 FIGSCNGIVCIADNEYTSLVICWNPSTRKFKELPL----FEKPMTG-VNVMTFGFGYDSS 175

Query: 240 LDDYKVVKAMQY 275
            D+YKVV  ++Y
Sbjct: 176 KDNYKVVVVLEY 187