BLASTX nr result

ID: Coptis23_contig00038575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038575
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804...    66   3e-09
ref|XP_002518826.1| conserved hypothetical protein [Ricinus comm...    65   6e-09
ref|XP_002315084.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_003545739.1| PREDICTED: protein strawberry notch-like [Gl...    64   1e-08
ref|XP_003634816.1| PREDICTED: protein strawberry notch-like [Vi...    63   2e-08

>ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804594 [Glycine max]
          Length = 4413

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -1

Query: 176 RCAGCRMILTVKPGMVEFICPTCNLPQRLPPELM 75
           RCAGCRMILTV PG+ EF CPTC +PQ LPPELM
Sbjct: 32  RCAGCRMILTVAPGLTEFACPTCRMPQMLPPELM 65


>ref|XP_002518826.1| conserved hypothetical protein [Ricinus communis]
           gi|223541999|gb|EEF43544.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1281

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = -1

Query: 176 RCAGCRMILTVKPGMVEFICPTCNLPQRLPPELM 75
           RCAGCRMILTV PGMV+F+CPTC + Q LPPELM
Sbjct: 28  RCAGCRMILTVGPGMVDFVCPTCQMHQMLPPELM 61


>ref|XP_002315084.1| predicted protein [Populus trichocarpa] gi|222864124|gb|EEF01255.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = -1

Query: 176 RCAGCRMILTVKPGMVEFICPTCNLPQRLPPELM 75
           RCAGCRMILTV PG+ EF+CP+C +PQ LPPELM
Sbjct: 28  RCAGCRMILTVGPGITEFVCPSCKMPQMLPPELM 61


>ref|XP_003545739.1| PREDICTED: protein strawberry notch-like [Glycine max]
          Length = 1252

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 26/34 (76%), Positives = 29/34 (85%)
 Frame = -1

Query: 176 RCAGCRMILTVKPGMVEFICPTCNLPQRLPPELM 75
           RCAGCRMIL+V PG+ EF CPTC +PQ LPPELM
Sbjct: 30  RCAGCRMILSVAPGLTEFACPTCRMPQMLPPELM 63


>ref|XP_003634816.1| PREDICTED: protein strawberry notch-like [Vitis vinifera]
          Length = 1242

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 26/34 (76%), Positives = 29/34 (85%)
 Frame = -1

Query: 176 RCAGCRMILTVKPGMVEFICPTCNLPQRLPPELM 75
           RCAGCRMILTV  G+ EF+CPTC LPQ LPPEL+
Sbjct: 29  RCAGCRMILTVGAGLTEFVCPTCQLPQMLPPELV 62


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