BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038573
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531188.1| pentatricopeptide repeat-containing protein,...   162   3e-38
ref|XP_002305195.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-37
ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containi...   156   1e-36
emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]   156   1e-36
ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containi...   154   9e-36

>ref|XP_002531188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529229|gb|EEF31203.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score =  162 bits (410), Expect = 3e-38
 Identities = 74/116 (63%), Positives = 98/116 (84%)
 Frame = -1

Query: 348 LVWKVYEFMIERRIYPNESTTKIMINALCKEGKLQKSIDVLDRIHGKRCSPGVIVNTYLV 169
           LVWK+YE MI +RIYPNE+T + MINALCKEGKLQ  +D+LDRIHGKRC P VI+N  +V
Sbjct: 217 LVWKIYEHMIHKRIYPNEATIRTMINALCKEGKLQMFVDILDRIHGKRCRPLVIINACMV 276

Query: 168 YGMLEDGRIDEGVVLMKRMLQKNMIIDDVAYSLIIFAKLKDDNLESAMELYDEMLK 1
           + +L++GR+D G+ ++K MLQKNMI+D VAYSLI+FAK++  NL+SA+E+Y+ MLK
Sbjct: 277 FRILQEGRVDVGIGILKGMLQKNMILDTVAYSLIVFAKVRLGNLDSALEVYEAMLK 332


>ref|XP_002305195.1| predicted protein [Populus trichocarpa] gi|222848159|gb|EEE85706.1|
           predicted protein [Populus trichocarpa]
          Length = 556

 Score =  159 bits (403), Expect = 2e-37
 Identities = 74/116 (63%), Positives = 98/116 (84%)
 Frame = -1

Query: 348 LVWKVYEFMIERRIYPNESTTKIMINALCKEGKLQKSIDVLDRIHGKRCSPGVIVNTYLV 169
           L WK+YE M+ RR YPNE+T + MI+ALCKEGKLQ  +++LD+IHGKRCSP VIVNT LV
Sbjct: 216 LAWKIYEHMLHRRTYPNEATIESMISALCKEGKLQTIVNMLDKIHGKRCSPVVIVNTCLV 275

Query: 168 YGMLEDGRIDEGVVLMKRMLQKNMIIDDVAYSLIIFAKLKDDNLESAMELYDEMLK 1
           + +LE+GR++ G+ L+K ML+KNMI+D VAYSLI++AK+K  NL SAM++Y+EMLK
Sbjct: 276 FRILEEGRVEPGLALLKMMLRKNMILDTVAYSLIVYAKVKLGNLNSAMQVYEEMLK 331


>ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Vitis vinifera]
          Length = 547

 Score =  156 bits (395), Expect = 1e-36
 Identities = 71/115 (61%), Positives = 97/115 (84%)
 Frame = -1

Query: 348 LVWKVYEFMIERRIYPNESTTKIMINALCKEGKLQKSIDVLDRIHGKRCSPGVIVNTYLV 169
           LVWK+YE MI  R YPNE +  +MI+ALCKEG LQK +D+LDRIHGKRCSP VIVNT ++
Sbjct: 209 LVWKIYEHMIRVRKYPNEVSVSVMISALCKEGALQKFVDMLDRIHGKRCSPIVIVNTCMI 268

Query: 168 YGMLEDGRIDEGVVLMKRMLQKNMIIDDVAYSLIIFAKLKDDNLESAMELYDEML 4
           + MLE+GR+++G++++KR+LQKNMI+D ++YSLI +AK+K   L+SA E+Y+EML
Sbjct: 269 FRMLEEGRVEQGMLILKRLLQKNMILDTISYSLIAYAKVKYGTLDSAWEVYEEML 323


>emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]
          Length = 642

 Score =  156 bits (395), Expect = 1e-36
 Identities = 71/115 (61%), Positives = 97/115 (84%)
 Frame = -1

Query: 348 LVWKVYEFMIERRIYPNESTTKIMINALCKEGKLQKSIDVLDRIHGKRCSPGVIVNTYLV 169
           LVWK+YE MI  R YPNE +  +MI+ALCKEG LQK +D+LDRIHGKRCSP VIVNT ++
Sbjct: 209 LVWKIYEHMIRVRKYPNEVSVSVMISALCKEGALQKFVDMLDRIHGKRCSPIVIVNTCMI 268

Query: 168 YGMLEDGRIDEGVVLMKRMLQKNMIIDDVAYSLIIFAKLKDDNLESAMELYDEML 4
           + MLE+GR+++G++++KR+LQKNMI+D ++YSLI +AK+K   L+SA E+Y+EML
Sbjct: 269 FRMLEEGRVEQGMLILKRLLQKNMILDTISYSLIAYAKVKYGTLDSAWEVYEEML 323


>ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Cucumis sativus]
          Length = 539

 Score =  154 bits (388), Expect = 9e-36
 Identities = 66/113 (58%), Positives = 95/113 (84%)
 Frame = -1

Query: 345 VWKVYEFMIERRIYPNESTTKIMINALCKEGKLQKSIDVLDRIHGKRCSPGVIVNTYLVY 166
           VWK+YE MI +R+YPN  T +IMIN+LCKEGKLQ++ D+L+RIHG RCS  +IVN  L+Y
Sbjct: 213 VWKIYEQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRCSASLIVNACLIY 272

Query: 165 GMLEDGRIDEGVVLMKRMLQKNMIIDDVAYSLIIFAKLKDDNLESAMELYDEM 7
            +LE+GR+++G+ L+KRMLQKNM++DD+AYSLI++AK+K  ++ S  E+++EM
Sbjct: 273 RILEEGRVEDGITLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEM 325