BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038563
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310039.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
ref|XP_002515231.1| pentatricopeptide repeat-containing protein,...   159   2e-37
ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat...   159   2e-37
ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat...   156   2e-36
ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat...   155   3e-36

>ref|XP_002310039.1| predicted protein [Populus trichocarpa] gi|222852942|gb|EEE90489.1|
           predicted protein [Populus trichocarpa]
          Length = 507

 Score =  160 bits (405), Expect = 1e-37
 Identities = 73/100 (73%), Positives = 92/100 (92%)
 Frame = +1

Query: 10  FFHTSYSYDTLLYILGRNRKFDKMWEVLVEMRKKDKSLITTRTVQVVLARVAKVCSVRQT 189
           F+H+SYS DT+LYILGR+RKFD +W+VL+++++KD++LIT RT+QVVL RVAKVCSVR T
Sbjct: 105 FYHSSYSLDTMLYILGRSRKFDHIWDVLIDIKRKDRNLITPRTLQVVLGRVAKVCSVRMT 164

Query: 190 VESFRRFRKMVLVFDTSCYNGLLRTLCQEKSMSDARNVYH 309
           VESF +F+++V VFDTSC+N LLRTLCQEKSMSDARNVYH
Sbjct: 165 VESFWKFKRLVPVFDTSCFNALLRTLCQEKSMSDARNVYH 204


>ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545711|gb|EEF47215.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 505

 Score =  159 bits (403), Expect = 2e-37
 Identities = 72/100 (72%), Positives = 91/100 (91%)
 Frame = +1

Query: 10  FFHTSYSYDTLLYILGRNRKFDKMWEVLVEMRKKDKSLITTRTVQVVLARVAKVCSVRQT 189
           F+HT YS DT+LYILGR+RKFD +W+VL++M++KD+ LI+ RT+Q+VLARVAK+CSVRQT
Sbjct: 101 FYHTPYSLDTILYILGRSRKFDHIWDVLIKMKRKDRFLISPRTMQIVLARVAKLCSVRQT 160

Query: 190 VESFRRFRKMVLVFDTSCYNGLLRTLCQEKSMSDARNVYH 309
           VESFR+F+K V V DT+C+N LLRTLCQEKSM+DARNVYH
Sbjct: 161 VESFRKFKKFVSVLDTTCFNALLRTLCQEKSMTDARNVYH 200


>ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Vitis vinifera]
          Length = 526

 Score =  159 bits (402), Expect = 2e-37
 Identities = 72/100 (72%), Positives = 92/100 (92%)
 Frame = +1

Query: 10  FFHTSYSYDTLLYILGRNRKFDKMWEVLVEMRKKDKSLITTRTVQVVLARVAKVCSVRQT 189
           F+HT +S DT+LYILGR+R+FD++WE+LV+MR+KD+SLI+ R+VQVVL R+AKVCSV+QT
Sbjct: 122 FYHTPFSLDTMLYILGRSRRFDQIWELLVDMRRKDQSLISPRSVQVVLGRIAKVCSVKQT 181

Query: 190 VESFRRFRKMVLVFDTSCYNGLLRTLCQEKSMSDARNVYH 309
           VESFR+F+K+V  FDT+C+N LLRTLCQEKSM DARNVYH
Sbjct: 182 VESFRKFKKLVPEFDTACFNALLRTLCQEKSMRDARNVYH 221


>ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Glycine max]
          Length = 500

 Score =  156 bits (394), Expect = 2e-36
 Identities = 71/100 (71%), Positives = 89/100 (89%)
 Frame = +1

Query: 10  FFHTSYSYDTLLYILGRNRKFDKMWEVLVEMRKKDKSLITTRTVQVVLARVAKVCSVRQT 189
           F+H+S+S DT+LYILGR+R F ++WE+L+E R+KD++ IT RTV VVL R+AKVCSVRQT
Sbjct: 96  FYHSSFSLDTMLYILGRSRMFGQVWELLIEARRKDQTAITARTVMVVLGRIAKVCSVRQT 155

Query: 190 VESFRRFRKMVLVFDTSCYNGLLRTLCQEKSMSDARNVYH 309
           VESFR+FRK+V  FDT+C+N LLRTLCQEKSM+DARNVYH
Sbjct: 156 VESFRKFRKLVQEFDTNCFNALLRTLCQEKSMADARNVYH 195


>ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Cucumis sativus]
          Length = 495

 Score =  155 bits (392), Expect = 3e-36
 Identities = 72/100 (72%), Positives = 88/100 (88%)
 Frame = +1

Query: 10  FFHTSYSYDTLLYILGRNRKFDKMWEVLVEMRKKDKSLITTRTVQVVLARVAKVCSVRQT 189
           F+HTS+S DT+LYILGR+RKFDK+W+VL++++ KD SLI+ RTV VVL R+AKVCSVRQT
Sbjct: 104 FYHTSFSVDTMLYILGRSRKFDKIWDVLLDVKFKDPSLISLRTVMVVLGRIAKVCSVRQT 163

Query: 190 VESFRRFRKMVLVFDTSCYNGLLRTLCQEKSMSDARNVYH 309
           VESFR+F+K V  FD +C+N LLRTLCQEKSM DARNVYH
Sbjct: 164 VESFRKFKKFVPEFDVTCFNALLRTLCQEKSMMDARNVYH 203