BLASTX nr result

ID: Coptis23_contig00038561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038561
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633433.1| PREDICTED: BTB/POZ domain-containing protein...   102   4e-20
ref|XP_003632782.1| PREDICTED: BTB/POZ domain-containing protein...    95   5e-18
emb|CBI25397.3| unnamed protein product [Vitis vinifera]               94   1e-17
emb|CAN69253.1| hypothetical protein VITISV_038147 [Vitis vinifera]    92   4e-17
ref|XP_002520826.1| protein binding protein, putative [Ricinus c...    78   7e-13

>ref|XP_003633433.1| PREDICTED: BTB/POZ domain-containing protein At3g56230-like [Vitis
           vinifera]
          Length = 270

 Score =  102 bits (253), Expect = 4e-20
 Identities = 54/84 (64%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
 Frame = +2

Query: 5   SNNVDTNSVSQSNTAKGFANVLKLITEMKEREEMLNDKLSFLSGLVVAFKDEIHTDIQVK 184
           SNN   + VS +N++KGF+N LK + EMKE EE LN+KLSFL G   AF+D+IHTDI+VK
Sbjct: 47  SNN---SIVSPANSSKGFSNALKWVKEMKEIEEELNEKLSFLGGFAAAFRDQIHTDIEVK 103

Query: 185 PS-NGPSIPAHRSLLAARSTIFKN 253
           P  NGPS+ AHR+LLAARS IFKN
Sbjct: 104 PGHNGPSLFAHRALLAARSEIFKN 127


>ref|XP_003632782.1| PREDICTED: BTB/POZ domain-containing protein At3g56230-like [Vitis
           vinifera]
          Length = 216

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 51/84 (60%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
 Frame = +2

Query: 5   SNNVDTNSVSQSNTAKGFANVLKLITEMKEREEMLNDKLSFLSGLVVAFKDEIHTDIQVK 184
           SNN   ++V  +N++KGF+N LK + EMKE EE LN+KLSFL G   AF D+IHT I+VK
Sbjct: 37  SNN---STVFPANSSKGFSNALKWVQEMKEIEEELNEKLSFLGGFAAAFGDQIHTHIEVK 93

Query: 185 PS-NGPSIPAHRSLLAARSTIFKN 253
           P  NGPS+ AHR+LLA RS IFKN
Sbjct: 94  PGHNGPSLFAHRTLLATRSEIFKN 117


>emb|CBI25397.3| unnamed protein product [Vitis vinifera]
          Length = 281

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 47/69 (68%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
 Frame = +2

Query: 50  KGFANVLKLITEMKEREEMLNDKLSFLSGLVVAFKDEIHTDIQVKPS-NGPSIPAHRSLL 226
           +GF+N LK + EMKE EE LN+KLSFL G   AF+D+IHTDI+VKP  NGPS+ AHR+LL
Sbjct: 70  QGFSNALKWVKEMKEIEEELNEKLSFLGGFAAAFRDQIHTDIEVKPGHNGPSLFAHRALL 129

Query: 227 AARSTIFKN 253
           AARS IFKN
Sbjct: 130 AARSEIFKN 138


>emb|CAN69253.1| hypothetical protein VITISV_038147 [Vitis vinifera]
          Length = 611

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 50/84 (59%), Positives = 62/84 (73%), Gaps = 1/84 (1%)
 Frame = +2

Query: 5   SNNVDTNSVSQSNTAKGFANVLKLITEMKEREEMLNDKLSFLSGLVVAFKDEIHTDIQVK 184
           SNN   ++V  +N++KGF+N LK + EMKE EE LN+KLSFL G   AF D+IHT I+VK
Sbjct: 320 SNN---STVFPANSSKGFSNALKWVQEMKEIEEELNEKLSFLEGFAAAFGDQIHTHIEVK 376

Query: 185 PS-NGPSIPAHRSLLAARSTIFKN 253
           P  NGPS+ AH +LLA RS IFKN
Sbjct: 377 PGHNGPSLFAHITLLATRSEIFKN 400


>ref|XP_002520826.1| protein binding protein, putative [Ricinus communis]
           gi|223539957|gb|EEF41535.1| protein binding protein,
           putative [Ricinus communis]
          Length = 267

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 40/73 (54%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
 Frame = +2

Query: 38  SNTAKGFANVLKLITEMKEREEMLNDKLSFLSGLVVAFKDEIHTDIQVKPSN-GPSIPAH 214
           S+  +  ANV K +  MKE E+ LN+K++FLSG V  F+ +I TDIQ+ P N GPS+ AH
Sbjct: 49  SSVPQPLANVAKWMNNMKETEDELNEKINFLSGFVALFRQQILTDIQLIPGNGGPSVSAH 108

Query: 215 RSLLAARSTIFKN 253
           R+LLAARS IF+N
Sbjct: 109 RALLAARSEIFRN 121


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