BLASTX nr result

ID: Coptis23_contig00038550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038550
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69109.1| hypothetical protein VITISV_025716 [Vitis vinifera]    51   3e-07

>emb|CAN69109.1| hypothetical protein VITISV_025716 [Vitis vinifera]
          Length = 1241

 Score = 50.8 bits (120), Expect(2) = 3e-07
 Identities = 24/45 (53%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
 Frame = +3

Query: 15  ERDNLWRKVIVS*FGESHLGWLSGLVTSPY--GVWKGILKVWEEF 143
           ER++ WRKVIV  FGE   GW + +V   Y  G+WK I K WEEF
Sbjct: 458 ERESFWRKVIVGKFGEEEGGWTTRVVRESYGMGLWKDIKKGWEEF 502



 Score = 28.5 bits (62), Expect(2) = 3e-07
 Identities = 12/53 (22%), Positives = 27/53 (50%)
 Frame = +1

Query: 172 WNMGIDTTLPNKDIVSVVALTDMLESIPPVRPDKDKRLWAINNKGKFSIRSWY 330
           W +    +  + ++  V    D + ++  V+  +D   W I  +GKF+++S+Y
Sbjct: 538 WEVHFRRSFQDWELEEVTRFLDHIXAVK-VQEWEDSLFWKIERRGKFNVKSYY 589


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