BLASTX nr result

ID: Coptis23_contig00038541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038541
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33593.3| unnamed protein product [Vitis vinifera]               86   4e-15
emb|CAN73170.1| hypothetical protein VITISV_030502 [Vitis vinifera]    86   4e-15
ref|XP_002868815.1| S-adenosyl-L-methionine:carboxyl methyltrans...    82   4e-14
ref|XP_002302990.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002277876.1| PREDICTED: probable S-adenosylmethionine-dep...    79   4e-13

>emb|CBI33593.3| unnamed protein product [Vitis vinifera]
          Length = 806

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 46/90 (51%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
 Frame = +2

Query: 80  QTTKGDTENKMEKEKKNSAKSFSMNGGDGPNSYLKNSSYQRGAVDGAKGMIREAIEEKLY 259
           + T G T+  M+KE  N  +S+ MN GDGP SY K SSYQ+  VD AK M+ EAI + L 
Sbjct: 408 EMTNGKTKMLMDKEVSNG-ESYHMNSGDGPYSYAKYSSYQKAIVDAAKKMLVEAISDNLD 466

Query: 260 ISSSS--PSDTIYIADLGCSVGQNTFIAIQ 343
           I++ S   S+T+ IAD+GCS+G N FIA+Q
Sbjct: 467 INNPSFGSSNTLRIADMGCSIGPNAFIAVQ 496



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/71 (50%), Positives = 47/71 (66%)
 Frame = +2

Query: 131 SAKSFSMNGGDGPNSYLKNSSYQRGAVDGAKGMIREAIEEKLYISSSSPSDTIYIADLGC 310
           S +S  MNGG+G  SY +NSS QR  V+ +K +I EA+ EKL    ++ S    IADLGC
Sbjct: 5   STESCPMNGGNGQYSYTRNSSIQRWGVEASKALIGEAVWEKL---DTNFSTLFNIADLGC 61

Query: 311 SVGQNTFIAIQ 343
           SVG NTFI ++
Sbjct: 62  SVGPNTFIVVE 72


>emb|CAN73170.1| hypothetical protein VITISV_030502 [Vitis vinifera]
          Length = 521

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 46/90 (51%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
 Frame = +2

Query: 80  QTTKGDTENKMEKEKKNSAKSFSMNGGDGPNSYLKNSSYQRGAVDGAKGMIREAIEEKLY 259
           + T G T+  M+KE  N  +S+ MN GDGP SY K SSYQ+  VD AK M+ EAI + L 
Sbjct: 123 EMTNGKTKMLMDKEVSNG-ESYHMNSGDGPYSYAKYSSYQKAIVDAAKKMLVEAISDNLD 181

Query: 260 ISSSS--PSDTIYIADLGCSVGQNTFIAIQ 343
           I++ S   S+T+ IAD+GCS+G N FIA+Q
Sbjct: 182 INNPSFGSSNTLRIADMGCSIGPNAFIAVQ 211


>ref|XP_002868815.1| S-adenosyl-L-methionine:carboxyl methyltransferase family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297314651|gb|EFH45074.1|
           S-adenosyl-L-methionine:carboxyl methyltransferase
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 411

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 44/83 (53%), Positives = 58/83 (69%), Gaps = 5/83 (6%)
 Frame = +2

Query: 110 MEKEKKNSA--KSFSMNGGDGPNSYLKNSSYQRGAVDGAKGMIREAIEEKL---YISSSS 274
           +EK +K     +SF MNGGDGP+SYL NSSYQ+ A+DGAK   REAI EKL    ++ +S
Sbjct: 45  VEKHRKMPTFPQSFPMNGGDGPHSYLHNSSYQKVAIDGAKERTREAILEKLDLELLNRNS 104

Query: 275 PSDTIYIADLGCSVGQNTFIAIQ 343
            ++ + IAD GCS+G NTF  +Q
Sbjct: 105 DANILRIADFGCSIGPNTFDVVQ 127


>ref|XP_002302990.1| predicted protein [Populus trichocarpa] gi|222844716|gb|EEE82263.1|
           predicted protein [Populus trichocarpa]
          Length = 370

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/79 (50%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
 Frame = +2

Query: 116 KEKKNSAKSFSMNGGDGPNSYLKNSSYQRGAVDGAKGMIREAIEEKLYISS---SSPSDT 286
           +E K   KS++M GGDGP SY +NS+YQ+G VD +K  + E I++KL   S    S +DT
Sbjct: 4   EEIKELPKSWAMVGGDGPQSYTQNSAYQKGVVDASKEKVTEGIKDKLDFKSLGFDSSNDT 63

Query: 287 IYIADLGCSVGQNTFIAIQ 343
             IAD GCSVG NTF A++
Sbjct: 64  FRIADFGCSVGPNTFFAVE 82


>ref|XP_002277876.1| PREDICTED: probable S-adenosylmethionine-dependent
           methyltransferase At5g38780 [Vitis vinifera]
           gi|297734281|emb|CBI15528.3| unnamed protein product
           [Vitis vinifera]
          Length = 369

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 40/77 (51%), Positives = 50/77 (64%)
 Frame = +2

Query: 113 EKEKKNSAKSFSMNGGDGPNSYLKNSSYQRGAVDGAKGMIREAIEEKLYISSSSPSDTIY 292
           EKE +N  ++  M  GDG  SY  NS  QRG ++ AK ++ EAI E L I   SPS T+ 
Sbjct: 4   EKEMRNIGEAHPMKSGDGLYSYSNNSYLQRGVMNAAKQIVSEAIVENLDILKFSPSTTVR 63

Query: 293 IADLGCSVGQNTFIAIQ 343
           +ADLGCSVG NTF A+Q
Sbjct: 64  VADLGCSVGPNTFFAVQ 80


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