BLASTX nr result

ID: Coptis23_contig00038532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038532
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274456.2| PREDICTED: probable protein phosphatase 2C 5...   110   1e-22
emb|CBI30073.3| unnamed protein product [Vitis vinifera]              110   1e-22
ref|NP_193391.3| putative protein phosphatase 2C 55 [Arabidopsis...   101   7e-20
dbj|BAC42578.1| unknown protein [Arabidopsis thaliana] gi|289508...   101   7e-20
ref|XP_002868114.1| hypothetical protein ARALYDRAFT_493218 [Arab...   101   7e-20

>ref|XP_002274456.2| PREDICTED: probable protein phosphatase 2C 55-like [Vitis vinifera]
          Length = 254

 Score =  110 bits (275), Expect = 1e-22
 Identities = 61/99 (61%), Positives = 72/99 (72%), Gaps = 3/99 (3%)
 Frame = -1

Query: 288 SCELAIKNEPRGCVDPQRVLNSAYSDTLGLGSSTACIITL-RNKSLHAVNVGDSGFRVFR 112
           +C LA+ +E +G V+P  VLN AY  T   GSSTACIITL R+  LH VNVGDSGF +FR
Sbjct: 66  NCVLALDSENKGVVNPMMVLNEAYFKTKAPGSSTACIITLTRDNYLHVVNVGDSGFMLFR 125

Query: 111 RGEGCVYRSPVQQHQFNCPYQLGITK--DHPSSAEVLEV 1
            GE  VY+SP+QQ  FNCPYQLG +K  D PSSAE L+V
Sbjct: 126 DGE-MVYKSPIQQRGFNCPYQLGRSKGSDRPSSAEELKV 163


>emb|CBI30073.3| unnamed protein product [Vitis vinifera]
          Length = 1379

 Score =  110 bits (275), Expect = 1e-22
 Identities = 61/99 (61%), Positives = 72/99 (72%), Gaps = 3/99 (3%)
 Frame = -1

Query: 288  SCELAIKNEPRGCVDPQRVLNSAYSDTLGLGSSTACIITL-RNKSLHAVNVGDSGFRVFR 112
            +C LA+ +E +G V+P  VLN AY  T   GSSTACIITL R+  LH VNVGDSGF +FR
Sbjct: 1096 NCVLALDSENKGVVNPMMVLNEAYFKTKAPGSSTACIITLTRDNYLHVVNVGDSGFMLFR 1155

Query: 111  RGEGCVYRSPVQQHQFNCPYQLGITK--DHPSSAEVLEV 1
             GE  VY+SP+QQ  FNCPYQLG +K  D PSSAE L+V
Sbjct: 1156 DGE-MVYKSPIQQRGFNCPYQLGRSKGSDRPSSAEELKV 1193


>ref|NP_193391.3| putative protein phosphatase 2C 55 [Arabidopsis thaliana]
           gi|226739227|sp|Q9SUK9.2|P2C55_ARATH RecName:
           Full=Probable protein phosphatase 2C 55; Short=AtPP2C55
           gi|332658373|gb|AEE83773.1| putative protein phosphatase
           2C 55 [Arabidopsis thaliana]
          Length = 467

 Score =  101 bits (251), Expect = 7e-20
 Identities = 54/94 (57%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
 Frame = -1

Query: 276 AIKNEPRGCVDPQRVLNSAYSDTLGLGSSTACIITLRNKSLHAVNVGDSGFRVFRRGEGC 97
           AI++EP+G +DP RVL  A++ T   GSSTACII L N+ LHA+N+GDSGF V R G   
Sbjct: 278 AIQDEPKGSIDPARVLEKAHTCTKSQGSSTACIIALTNQGLHAINLGDSGFMVVREGH-T 336

Query: 96  VYRSPVQQHQFNCPYQL--GITKDHPSSAEVLEV 1
           V+RSPVQQH FN  YQL  G   D PSS +V  V
Sbjct: 337 VFRSPVQQHDFNFTYQLESGRNGDLPSSGQVFTV 370


>dbj|BAC42578.1| unknown protein [Arabidopsis thaliana] gi|28950865|gb|AAO63356.1|
           At4g16580 [Arabidopsis thaliana]
          Length = 300

 Score =  101 bits (251), Expect = 7e-20
 Identities = 54/94 (57%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
 Frame = -1

Query: 276 AIKNEPRGCVDPQRVLNSAYSDTLGLGSSTACIITLRNKSLHAVNVGDSGFRVFRRGEGC 97
           AI++EP+G +DP RVL  A++ T   GSSTACII L N+ LHA+N+GDSGF V R G   
Sbjct: 111 AIQDEPKGSIDPARVLEKAHTCTKSQGSSTACIIALTNQGLHAINLGDSGFMVVREGH-T 169

Query: 96  VYRSPVQQHQFNCPYQL--GITKDHPSSAEVLEV 1
           V+RSPVQQH FN  YQL  G   D PSS +V  V
Sbjct: 170 VFRSPVQQHDFNFTYQLESGRNGDLPSSGQVFTV 203


>ref|XP_002868114.1| hypothetical protein ARALYDRAFT_493218 [Arabidopsis lyrata subsp.
           lyrata] gi|297313950|gb|EFH44373.1| hypothetical protein
           ARALYDRAFT_493218 [Arabidopsis lyrata subsp. lyrata]
          Length = 467

 Score =  101 bits (251), Expect = 7e-20
 Identities = 54/94 (57%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
 Frame = -1

Query: 276 AIKNEPRGCVDPQRVLNSAYSDTLGLGSSTACIITLRNKSLHAVNVGDSGFRVFRRGEGC 97
           AI++EP+G +DP RVL  A++ T   GSSTACII L N+ LHA+N+GDSGF V R G   
Sbjct: 278 AIQDEPKGSIDPARVLEKAHTCTKSQGSSTACIIALTNQGLHAINLGDSGFMVVREGH-T 336

Query: 96  VYRSPVQQHQFNCPYQL--GITKDHPSSAEVLEV 1
           V+RSPVQQH FN  YQL  G   D PSS +V  V
Sbjct: 337 VFRSPVQQHDFNFTYQLESGRNGDLPSSGQVFTV 370


Top