BLASTX nr result

ID: Coptis23_contig00038531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038531
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303291.1| predicted protein [Populus trichocarpa] gi|2...   165   4e-39
ref|XP_004150349.1| PREDICTED: rho guanine nucleotide exchange f...   164   7e-39
ref|XP_002324425.1| predicted protein [Populus trichocarpa] gi|2...   164   9e-39
ref|XP_002887856.1| hypothetical protein ARALYDRAFT_477280 [Arab...   163   1e-38
ref|XP_004166838.1| PREDICTED: LOW QUALITY PROTEIN: rho guanine ...   163   2e-38

>ref|XP_002303291.1| predicted protein [Populus trichocarpa] gi|222840723|gb|EEE78270.1|
           predicted protein [Populus trichocarpa]
          Length = 454

 Score =  165 bits (417), Expect = 4e-39
 Identities = 84/95 (88%), Positives = 87/95 (91%)
 Frame = +3

Query: 3   KLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEHRRLEPMSVENKARWRKEIDWLLSV 182
           KLLLGEDMSGGGKGVSSALALSNAITNLAASVFGE RRLEPMS E KARW +EIDWLLSV
Sbjct: 15  KLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQRRLEPMSPERKARWIREIDWLLSV 74

Query: 183 TEHIVEFVPSQQKSKDGINMEIMVTRQRTDLLMNI 287
           T+H+VE VPSQQKSKDG NMEIMVTRQR DL MNI
Sbjct: 75  TDHVVELVPSQQKSKDGSNMEIMVTRQRNDLHMNI 109


>ref|XP_004150349.1| PREDICTED: rho guanine nucleotide exchange factor 8-like [Cucumis
           sativus] gi|449516167|ref|XP_004165119.1| PREDICTED: rho
           guanine nucleotide exchange factor 8-like [Cucumis
           sativus]
          Length = 515

 Score =  164 bits (415), Expect = 7e-39
 Identities = 86/95 (90%), Positives = 88/95 (92%)
 Frame = +3

Query: 3   KLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEHRRLEPMSVENKARWRKEIDWLLSV 182
           KLLLGEDMSGGGKGVSSALALSNAITNLAASVFGE  RLEPMSVE KARWRKEID LLSV
Sbjct: 68  KLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSV 127

Query: 183 TEHIVEFVPSQQKSKDGINMEIMVTRQRTDLLMNI 287
           T++IVEFVPSQQKSKDG NMEIMVTRQR DL MNI
Sbjct: 128 TDYIVEFVPSQQKSKDGTNMEIMVTRQRNDLHMNI 162


>ref|XP_002324425.1| predicted protein [Populus trichocarpa] gi|222865859|gb|EEF02990.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score =  164 bits (414), Expect = 9e-39
 Identities = 84/95 (88%), Positives = 90/95 (94%)
 Frame = +3

Query: 3   KLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEHRRLEPMSVENKARWRKEIDWLLSV 182
           KLLLGEDMSGGGKGVSSALALSNAITNLAASVFGE ++LEPM+ E KARWRKEIDWLLSV
Sbjct: 10  KLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQKKLEPMNPERKARWRKEIDWLLSV 69

Query: 183 TEHIVEFVPSQQKSKDGINMEIMVTRQRTDLLMNI 287
           T+HIVEFVPSQQ SKDGI+MEIM TRQR+DLLMNI
Sbjct: 70  TDHIVEFVPSQQ-SKDGIDMEIMTTRQRSDLLMNI 103


>ref|XP_002887856.1| hypothetical protein ARALYDRAFT_477280 [Arabidopsis lyrata subsp.
           lyrata] gi|297333697|gb|EFH64115.1| hypothetical protein
           ARALYDRAFT_477280 [Arabidopsis lyrata subsp. lyrata]
          Length = 515

 Score =  163 bits (413), Expect = 1e-38
 Identities = 82/95 (86%), Positives = 86/95 (90%)
 Frame = +3

Query: 3   KLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEHRRLEPMSVENKARWRKEIDWLLSV 182
           KLLLGED SGGGKGVSSALALSNAITNLAASVFGE RRLEPM  E +ARWRKEIDWLLSV
Sbjct: 102 KLLLGEDNSGGGKGVSSALALSNAITNLAASVFGEQRRLEPMPAERRARWRKEIDWLLSV 161

Query: 183 TEHIVEFVPSQQKSKDGINMEIMVTRQRTDLLMNI 287
           TE++VEF PSQQK+KDG NMEIM TRQRTDL MNI
Sbjct: 162 TEYVVEFAPSQQKNKDGTNMEIMTTRQRTDLHMNI 196


>ref|XP_004166838.1| PREDICTED: LOW QUALITY PROTEIN: rho guanine nucleotide exchange
           factor 8-like [Cucumis sativus]
          Length = 553

 Score =  163 bits (412), Expect = 2e-38
 Identities = 85/95 (89%), Positives = 88/95 (92%)
 Frame = +3

Query: 3   KLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEHRRLEPMSVENKARWRKEIDWLLSV 182
           KLLLGEDMSGGGKGVSSALALSNAITNLAASVFGE  RLEPMSVE KARWRKEID LLSV
Sbjct: 117 KLLLGEDMSGGGKGVSSALALSNAITNLAASVFGEQWRLEPMSVERKARWRKEIDLLLSV 176

Query: 183 TEHIVEFVPSQQKSKDGINMEIMVTRQRTDLLMNI 287
           T++IVEFVPSQQKSKDG NMEIMVTRQR DL +NI
Sbjct: 177 TDYIVEFVPSQQKSKDGTNMEIMVTRQRNDLHLNI 211


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