BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038528
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat...    81   1e-13
emb|CBI41047.3| unnamed protein product [Vitis vinifera]               81   1e-13
emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]    81   1e-13
ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat...    77   1e-12
ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12

>ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g65820-like [Vitis vinifera]
          Length = 622

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 46/77 (59%), Positives = 50/77 (64%)
 Frame = -2

Query: 296 FAMLMRGLKKLYNRQIALEITEKVRKMAADREMTFKMYKRRGEXXXXXXXXXXXXXXXXX 117
           FA LMRGL+KLYNRQIA EITEKVRKMAA+REMTFKMYKRRGE                 
Sbjct: 547 FAKLMRGLRKLYNRQIAAEITEKVRKMAAEREMTFKMYKRRGE--RNLKEKIKEAKDGRK 604

Query: 116 XXXXXRQWGKNQGRADI 66
                R+WG   GRA+I
Sbjct: 605 RRARRRRWGGGHGRANI 621


>emb|CBI41047.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 46/77 (59%), Positives = 50/77 (64%)
 Frame = -2

Query: 296 FAMLMRGLKKLYNRQIALEITEKVRKMAADREMTFKMYKRRGEXXXXXXXXXXXXXXXXX 117
           FA LMRGL+KLYNRQIA EITEKVRKMAA+REMTFKMYKRRGE                 
Sbjct: 439 FAKLMRGLRKLYNRQIAAEITEKVRKMAAEREMTFKMYKRRGE--RNLKEKIKEAKDGRK 496

Query: 116 XXXXXRQWGKNQGRADI 66
                R+WG   GRA+I
Sbjct: 497 RRARRRRWGGGHGRANI 513


>emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
          Length = 655

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 46/77 (59%), Positives = 50/77 (64%)
 Frame = -2

Query: 296 FAMLMRGLKKLYNRQIALEITEKVRKMAADREMTFKMYKRRGEXXXXXXXXXXXXXXXXX 117
           FA LMRGL+KLYNRQIA EITEKVRKMAA+REMTFKMYKRRGE                 
Sbjct: 580 FAKLMRGLRKLYNRQIAAEITEKVRKMAAEREMTFKMYKRRGE--RNLKEKIKEAKDGRK 637

Query: 116 XXXXXRQWGKNQGRADI 66
                R+WG   GRA+I
Sbjct: 638 RRARRRRWGGGHGRANI 654


>ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g65820-like [Glycine max]
          Length = 628

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/43 (86%), Positives = 40/43 (93%)
 Frame = -2

Query: 296 FAMLMRGLKKLYNRQIALEITEKVRKMAADREMTFKMYKRRGE 168
           FA LMRGLKKLYNR+ A EITEKVRKMAADR++TFKMYKRRGE
Sbjct: 556 FAKLMRGLKKLYNREFAAEITEKVRKMAADRKITFKMYKRRGE 598


>ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49730-like [Cucumis sativus]
          Length = 664

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/43 (83%), Positives = 42/43 (97%)
 Frame = -2

Query: 296 FAMLMRGLKKLYNRQIALEITEKVRKMAADREMTFKMYKRRGE 168
           FA LMRGLKKL++RQ+A+EITEKVRKMAADR++TFKMYKRRGE
Sbjct: 589 FAKLMRGLKKLFHRQLAVEITEKVRKMAADRQITFKMYKRRGE 631