BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038502
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312805.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06
gb|ABA99612.1| retrotransposon protein, putative, unclassified [...    55   8e-06
gb|ABA95820.1| retrotransposon protein, putative, unclassified [...    55   8e-06
gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza...    55   8e-06
ref|NP_001064026.2| Os10g0106900 [Oryza sativa Japonica Group] g...    55   8e-06

>ref|XP_002312805.1| predicted protein [Populus trichocarpa] gi|222849213|gb|EEE86760.1|
           predicted protein [Populus trichocarpa]
          Length = 104

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
 Frame = -2

Query: 214 MNTAYALTNFNYSQTLIPIFGGESYDFLSLHMRTPFISQDLWELVVDGYKEPADAMPLET 35
           M ++ +++ F+Y+ T IPIF G  Y++ S  M T FISQDLW LV +G  EP        
Sbjct: 1   MASSSSISTFSYTTTQIPIFDGYHYEYWSSQMETIFISQDLWTLVDEGLAEPPQEGSSSN 60

Query: 34  LTPE--QEYKDN 5
            + E  ++YK N
Sbjct: 61  WSEEDVKDYKQN 72


>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1198

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/54 (46%), Positives = 39/54 (72%)
 Frame = -2

Query: 178 SQTLIPIFGGESYDFLSLHMRTPFISQDLWELVVDGYKEPADAMPLETLTPEQE 17
           +Q+++P+F GE+YD  S+ MRT  +SQ LW++V +GY+E +     ETLT EQ+
Sbjct: 2   AQSMVPVFAGENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAG---ETLTAEQK 52


>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1142

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/54 (46%), Positives = 39/54 (72%)
 Frame = -2

Query: 178 SQTLIPIFGGESYDFLSLHMRTPFISQDLWELVVDGYKEPADAMPLETLTPEQE 17
           +Q+++P+F GE+YD  S+ MRT  +SQ LW++V +GY+E +     ETLT EQ+
Sbjct: 2   AQSMVPVFAGENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAG---ETLTAEQK 52


>gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza sativa Japonica Group]
           gi|31429795|gb|AAP51797.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1350

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/54 (46%), Positives = 39/54 (72%)
 Frame = -2

Query: 178 SQTLIPIFGGESYDFLSLHMRTPFISQDLWELVVDGYKEPADAMPLETLTPEQE 17
           +Q+++P+F GE+YD  S+ MRT  +SQ LW++V +GY+E +     ETLT EQ+
Sbjct: 2   AQSMVPVFAGENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAG---ETLTAEQK 52


>ref|NP_001064026.2| Os10g0106900 [Oryza sativa Japonica Group]
           gi|255679164|dbj|BAF25940.2| Os10g0106900 [Oryza sativa
           Japonica Group]
          Length = 646

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/54 (46%), Positives = 39/54 (72%)
 Frame = -2

Query: 178 SQTLIPIFGGESYDFLSLHMRTPFISQDLWELVVDGYKEPADAMPLETLTPEQE 17
           +Q+++P+F GE+YD  S+ MRT  +SQ LW++V +GY+E +     ETLT EQ+
Sbjct: 2   AQSMVPVFAGENYDIWSIKMRTLLLSQGLWDIVENGYQEYSAG---ETLTAEQK 52