BLASTX nr result

ID: Coptis23_contig00038498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038498
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280764.1| PREDICTED: transcriptional regulator SUPERMA...    62   4e-08
emb|CBI23578.3| unnamed protein product [Vitis vinifera]               60   2e-07
emb|CBI23579.3| unnamed protein product [Vitis vinifera]               55   5e-06
ref|XP_002280772.1| PREDICTED: transcriptional regulator SUPERMA...    55   5e-06
ref|XP_002315719.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002280764.1| PREDICTED: transcriptional regulator SUPERMAN-like [Vitis vinifera]
          Length = 228

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 43/90 (47%), Positives = 53/90 (58%), Gaps = 10/90 (11%)
 Frame = +3

Query: 3   SSQSPAYPTDE-KKTSVTNNPLDSTCLNDEDLSKTMKVLK---------GFMQEDECNIL 152
           SS S A P+D+ KK  V  + L+       DL+K MK  +         GF QEDE  +L
Sbjct: 139 SSPSSASPSDQVKKWGVDGSMLNPLSPRVLDLAK-MKTTQSSFGVGEYHGFTQEDEYKVL 197

Query: 153 KKGKMVMLDLEIGLHRNVTEDLDLELRLGY 242
           KK + V LDLEIGL  ++ EDLDLELRLGY
Sbjct: 198 KKAEFVRLDLEIGLLSDLKEDLDLELRLGY 227


>emb|CBI23578.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 36/80 (45%), Positives = 46/80 (57%)
 Frame = +3

Query: 3   SSQSPAYPTDEKKTSVTNNPLDSTCLNDEDLSKTMKVLKGFMQEDECNILKKGKMVMLDL 182
           SS S A P+D+ KT+ ++  +                  GF QEDE  +LKK + V LDL
Sbjct: 139 SSPSSASPSDQMKTTQSSFGVGE--------------YHGFTQEDEYKVLKKAEFVRLDL 184

Query: 183 EIGLHRNVTEDLDLELRLGY 242
           EIGL  ++ EDLDLELRLGY
Sbjct: 185 EIGLLSDLKEDLDLELRLGY 204


>emb|CBI23579.3| unnamed protein product [Vitis vinifera]
          Length = 202

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/55 (50%), Positives = 35/55 (63%)
 Frame = +3

Query: 78  LNDEDLSKTMKVLKGFMQEDECNILKKGKMVMLDLEIGLHRNVTEDLDLELRLGY 242
           LN       ++   G  QEDEC +LK  + V LDL+IGL  ++ EDLDLELRLGY
Sbjct: 147 LNAAQSFSGVEEFNGVNQEDECKVLKMAEFVRLDLKIGLPSDLKEDLDLELRLGY 201


>ref|XP_002280772.1| PREDICTED: transcriptional regulator SUPERMAN-like [Vitis vinifera]
          Length = 207

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/55 (50%), Positives = 35/55 (63%)
 Frame = +3

Query: 78  LNDEDLSKTMKVLKGFMQEDECNILKKGKMVMLDLEIGLHRNVTEDLDLELRLGY 242
           LN       ++   G  QEDEC +LK  + V LDL+IGL  ++ EDLDLELRLGY
Sbjct: 152 LNAAQSFSGVEEFNGVNQEDECKVLKMAEFVRLDLKIGLPSDLKEDLDLELRLGY 206


>ref|XP_002315719.1| predicted protein [Populus trichocarpa] gi|222864759|gb|EEF01890.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
 Frame = +3

Query: 12  SPAYPTDEKKTSVTNNPLDSTCLNDEDLSKT--------MKVLKGFMQEDECNILKKGKM 167
           +P   ++ KK ++   PLD +     DL+ T         +   GF Q+D   I KK ++
Sbjct: 127 TPPLASEVKKWTIDGTPLDPSSSELSDLTTTGTRKSFFTTENFGGFTQQDGFKIWKKAEI 186

Query: 168 VMLDLEIGLHRNVTEDLDLELRLG 239
           V LDLEIGL R+  ++LDLELRLG
Sbjct: 187 VRLDLEIGLVRDSKDELDLELRLG 210


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