BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038485
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACM17637.1| F-box family-4 [Oryza officinalis]                      74   2e-11
gb|AFK45533.1| unknown [Lotus japonicus]                               70   2e-10
gb|ACS49589.1| F-box family-3 [Oryza alta]                             70   2e-10
dbj|BAK03202.1| predicted protein [Hordeum vulgare subsp. vulgare]     69   3e-10
gb|EAY80319.1| hypothetical protein OsI_35490 [Oryza sativa Indi...    69   3e-10

>gb|ACM17637.1| F-box family-4 [Oryza officinalis]
          Length = 349

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/94 (40%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
 Frame = -3

Query: 291 VLHHILSFLPTEHAVRTCLLSSYWRNIWRFVHTLYFDESYDDTIEEKPQFDFTKFVDSVL 112
           +LHHIL FLP   AVRTC+L+  WR++W+F   L    +Y +  E  P      FVD +L
Sbjct: 100 ILHHILGFLPARDAVRTCVLAWRWRHLWKFATGLRI--TYREGREPVPMEKLRDFVDHLL 157

Query: 111 ILRDPSHLQKLHLNLVDLNVGES-RVNIWIRYSM 13
           +LR  + L+   LN   L+ G++ RVN+W R+++
Sbjct: 158 LLRGRAPLETCWLNFAQLSDGDARRVNLWFRHAV 191


>gb|AFK45533.1| unknown [Lotus japonicus]
          Length = 159

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 39/98 (39%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
 Frame = -3

Query: 291 VLHHILSFLPTEHAVRTCLLSSYWRNIWRFVHTLYFDE-SYDDTIEEKPQFDFTKFVDSV 115
           VL+HILSFLPT+ A  T +LS  W+ +W  V  L+FD+ SY   + +KP   FTKF+ + 
Sbjct: 13  VLYHILSFLPTQIAASTSVLSKRWKPLWLSVPALFFDDRSY--LLNDKPYLYFTKFIYAT 70

Query: 114 LILRD-PSHLQKLHLNLVDLNVGESRVNIWIRYSMKIG 4
           ++ RD P    +L       N   S +NIW+  ++K G
Sbjct: 71  ILTRDVPIRTFRLQCEDSHFNFSVSELNIWVNAAIKRG 108


>gb|ACS49589.1| F-box family-3 [Oryza alta]
          Length = 409

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/94 (37%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
 Frame = -3

Query: 291 VLHHILSFLPTEHAVRTCLLSSYWRNIWRFVHTLYFDESYDDTIEEKPQFDFTKFVDSVL 112
           +LHHIL FLP + AV+TC+L+  WR++W+F   L    +Y +  E  P       +D +L
Sbjct: 44  ILHHILGFLPAQDAVQTCVLARRWRHVWKFATGLRI--TYREGREPVPMEKLRDSMDHLL 101

Query: 111 ILRDPSHLQKLHLNLVDLNVGES-RVNIWIRYSM 13
           +LR  + L+   LN   L+ G++ RVN+W R+++
Sbjct: 102 LLRGRAPLETCWLNFAQLSDGDARRVNLWFRHAV 135


>dbj|BAK03202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 451

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
 Frame = -3

Query: 291 VLHHILSFLPTEHAVRTCLLSSYWRNIWRFVHTLYFDESYDDTIEEKPQFDFTKFVDSVL 112
           +LHH+LSFLP + AVRTC+L+  WR++WR    L      D+  E     D  KFVD +L
Sbjct: 69  ILHHMLSFLPAQAAVRTCVLAHRWRHLWRSTTGLRIGGLDDE--ESVHVQDIRKFVDHLL 126

Query: 111 ILRDPSHLQKLHLNLVD-LNVGESRVNIWIRYSM 13
           ILR+ + L  + +   + L   E  VN+WIR+++
Sbjct: 127 ILRERTDLDTVEIKFHEFLGDDEPYVNLWIRFAV 160


>gb|EAY80319.1| hypothetical protein OsI_35490 [Oryza sativa Indica Group]
           gi|221327781|gb|ACM17597.1| F-box family-2 [Oryza sativa
           Indica Group]
          Length = 403

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
 Frame = -3

Query: 291 VLHHILSFLPTEHAVRTCLLSSYWRNIWRFVHTLYFDESYDDTIEEKPQFDFTKFVDSVL 112
           VLHHIL FLP   AVRTCLL+  WR++W+    L   E Y   +E+        FV  +L
Sbjct: 32  VLHHILGFLPAPDAVRTCLLARRWRHLWKSATGLRISEGYG--VEK-----LHDFVHHLL 84

Query: 111 ILRDPSHLQKLHLNLVDLNVGESR-VNIWIRYSM 13
           +LR  + L    L  +DL VG++R +N+W R+++
Sbjct: 85  LLRGGAPLDTFELGSIDLAVGDNRSMNLWFRHAL 118