BLASTX nr result

ID: Coptis23_contig00038468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038468
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321234.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_002527271.1| conserved hypothetical protein [Ricinus comm...    74   9e-12
emb|CBI35674.3| unnamed protein product [Vitis vinifera]               73   2e-11
emb|CBI38280.3| unnamed protein product [Vitis vinifera]               73   2e-11
emb|CAN81120.1| hypothetical protein VITISV_030390 [Vitis vinifera]    73   2e-11

>ref|XP_002321234.1| predicted protein [Populus trichocarpa] gi|222862007|gb|EEE99549.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 35/60 (58%), Positives = 52/60 (86%)
 Frame = -1

Query: 203 KKAQEDKKKIRELSAELQRERRQSATYREQLNMVLKEMEDHTNHLSKQVENIVYNVKELE 24
           ++  E   KIREL+AELQRER++SA Y+EQL+MVL++ME+H+NHLS+ +++IV +VKE+E
Sbjct: 112 RRTDEKDVKIRELTAELQRERKRSAAYQEQLDMVLRDMEEHSNHLSRNIDDIVQSVKEIE 171


>ref|XP_002527271.1| conserved hypothetical protein [Ricinus communis]
           gi|223533364|gb|EEF35115.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 209

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/65 (52%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
 Frame = -1

Query: 209 ILKKAQEDKK-KIRELSAELQRERRQSATYREQLNMVLKEMEDHTNHLSKQVENIVYNVK 33
           +L +  ++K  KIREL+AELQRER++SA Y+EQL  VL++ME+H+NHLS+ +E++V +V+
Sbjct: 144 LLSQTPDEKDVKIRELTAELQRERKRSAAYQEQLYTVLRDMEEHSNHLSRNIEDVVQSVR 203

Query: 32  ELEPR 18
           E+E +
Sbjct: 204 EIESK 208


>emb|CBI35674.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 33/65 (50%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
 Frame = -1

Query: 209 ILKKAQEDKK-KIRELSAELQRERRQSATYREQLNMVLKEMEDHTNHLSKQVENIVYNVK 33
           +L +  ++K  KIREL+AELQRER++ A ++EQL+MVL++ME+H+NHLS+ ++ IV +V+
Sbjct: 549 LLSQTPDEKDIKIRELTAELQRERKRCAAFQEQLDMVLRDMEEHSNHLSRNIDGIVQSVR 608

Query: 32  ELEPR 18
           E+E +
Sbjct: 609 EIESK 613


>emb|CBI38280.3| unnamed protein product [Vitis vinifera]
          Length = 305

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 33/65 (50%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
 Frame = -1

Query: 209 ILKKAQEDKK-KIRELSAELQRERRQSATYREQLNMVLKEMEDHTNHLSKQVENIVYNVK 33
           +L +  ++K  KIREL+AELQRER++ A ++EQL+MVL++ME+H+NHLS+ ++ IV +V+
Sbjct: 177 LLSQTPDEKDIKIRELTAELQRERKRCAAFQEQLDMVLRDMEEHSNHLSRNIDGIVQSVR 236

Query: 32  ELEPR 18
           E+E +
Sbjct: 237 EIESK 241


>emb|CAN81120.1| hypothetical protein VITISV_030390 [Vitis vinifera]
          Length = 206

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 33/65 (50%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
 Frame = -1

Query: 209 ILKKAQEDKK-KIRELSAELQRERRQSATYREQLNMVLKEMEDHTNHLSKQVENIVYNVK 33
           +L +  ++K  KIREL+AELQRER++ A ++EQL+MVL++ME+H+NHLS+ ++ IV +V+
Sbjct: 134 LLSQTPDEKDIKIRELTAELQRERKRCAAFQEQLDMVLRDMEEHSNHLSRNIDGIVQSVR 193

Query: 32  ELEPR 18
           E+E +
Sbjct: 194 EIESK 198


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