BLASTX nr result

ID: Coptis23_contig00038464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038464
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267035.1| PREDICTED: uncharacterized protein LOC100243...   114   1e-23
emb|CBI25518.3| unnamed protein product [Vitis vinifera]              105   3e-21
ref|XP_002520900.1| alpha/beta hydrolase, putative [Ricinus comm...   105   3e-21
ref|XP_003526786.1| PREDICTED: 2-hydroxy-6-oxononadienedioate/2-...   103   1e-20
ref|XP_002319329.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20

>ref|XP_002267035.1| PREDICTED: uncharacterized protein LOC100243301 [Vitis vinifera]
          Length = 483

 Score =  114 bits (284), Expect = 1e-23
 Identities = 65/144 (45%), Positives = 86/144 (59%), Gaps = 14/144 (9%)
 Frame = -3

Query: 392 HSSGSLVAVNTYFEAPERXXXXXXXXXXXXXPR--------------KRNQTKREKRSEG 255
           HS+GS+VAVN+YFEAPER             P               + NQ  R+ + + 
Sbjct: 219 HSAGSIVAVNSYFEAPERVAALILVAPAILAPLSVCKVTKGNRLLKVEGNQLGRDDQIQE 278

Query: 254 SLSTSKVKENPFAMARNILSKFSTYIAWPIVRMLKGMMNTISSLFRRLLIAFLRSKVAVM 75
             S S + ENPF     ILSKFS YI   I +M+K   N ++SL+++ L A LRS  AVM
Sbjct: 279 GSSNSNIHENPFIRVCKILSKFSKYIVRAIAQMMKRTANMLNSLYKKALSAILRSAFAVM 338

Query: 74  LLRMVIDKFGVAAIRNAWYDASQI 3
           L+RM+ID+FG+AAIRNAW+D+SQI
Sbjct: 339 LVRMIIDRFGIAAIRNAWHDSSQI 362


>emb|CBI25518.3| unnamed protein product [Vitis vinifera]
          Length = 460

 Score =  105 bits (263), Expect = 3e-21
 Identities = 60/130 (46%), Positives = 80/130 (61%)
 Frame = -3

Query: 392 HSSGSLVAVNTYFEAPERXXXXXXXXXXXXXPRKRNQTKREKRSEGSLSTSKVKENPFAM 213
           HS+GS+VAVN+YFEAPER             P    +  +  R         + +NPF  
Sbjct: 219 HSAGSIVAVNSYFEAPERVAALILVAPAILAPLSVCKVTKGNR---------LLKNPFIR 269

Query: 212 ARNILSKFSTYIAWPIVRMLKGMMNTISSLFRRLLIAFLRSKVAVMLLRMVIDKFGVAAI 33
              ILSKFS YI   I +M+K   N ++SL+++ L A LRS  AVML+RM+ID+FG+AAI
Sbjct: 270 VCKILSKFSKYIVRAIAQMMKRTANMLNSLYKKALSAILRSAFAVMLVRMIIDRFGIAAI 329

Query: 32  RNAWYDASQI 3
           RNAW+D+SQI
Sbjct: 330 RNAWHDSSQI 339


>ref|XP_002520900.1| alpha/beta hydrolase, putative [Ricinus communis]
           gi|223540031|gb|EEF41609.1| alpha/beta hydrolase,
           putative [Ricinus communis]
          Length = 461

 Score =  105 bits (263), Expect = 3e-21
 Identities = 56/131 (42%), Positives = 84/131 (64%), Gaps = 1/131 (0%)
 Frame = -3

Query: 392 HSSGSLVAVNTYFEAPERXXXXXXXXXXXXXPRK-RNQTKREKRSEGSLSTSKVKENPFA 216
           HS+GSLVAVN+YFEAPER             P   RN+T R+ + +   S S +  N F 
Sbjct: 206 HSAGSLVAVNSYFEAPERIAALILVAPAIIAPSSGRNETGRDTQGKRKGSNSNMFSNQFI 265

Query: 215 MARNILSKFSTYIAWPIVRMLKGMMNTISSLFRRLLIAFLRSKVAVMLLRMVIDKFGVAA 36
               I+SKF+  +   I++M+KGM + + SL++++L   L S + VML+RM+IDKFG+AA
Sbjct: 266 KLLEIVSKFTAKVTQAIMQMVKGMTDMLKSLYKKVLSTILCSALGVMLIRMLIDKFGIAA 325

Query: 35  IRNAWYDASQI 3
           ++ AWYD++Q+
Sbjct: 326 VKIAWYDSNQV 336


>ref|XP_003526786.1| PREDICTED: 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-
           oxononatrienedioate hydrolase-like [Glycine max]
          Length = 490

 Score =  103 bits (257), Expect = 1e-20
 Identities = 58/134 (43%), Positives = 80/134 (59%), Gaps = 4/134 (2%)
 Frame = -3

Query: 392 HSSGSLVAVNTYFEAPERXXXXXXXXXXXXXPRKRNQTKREKRSEGSLST----SKVKEN 225
           HS+GSLVAVNTYFEAPER             P    +  +E +S     T    S +++N
Sbjct: 235 HSAGSLVAVNTYFEAPERVAALILVAPAIFAPLTTRKVVKENQSGHDNQTEEDNSSIRKN 294

Query: 224 PFAMARNILSKFSTYIAWPIVRMLKGMMNTISSLFRRLLIAFLRSKVAVMLLRMVIDKFG 45
           P      +LSK + YIA  I +M+K  ++ ++  +R+LL A LRS +A+ML+RM IDKFG
Sbjct: 295 PILGLYKMLSKTTKYIAEAISQMMKWTIDILNFWYRKLLSAILRSSLAIMLVRMAIDKFG 354

Query: 44  VAAIRNAWYDASQI 3
             A+RNAWYD  Q+
Sbjct: 355 TTAVRNAWYDPKQV 368


>ref|XP_002319329.1| predicted protein [Populus trichocarpa] gi|222857705|gb|EEE95252.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score =  103 bits (257), Expect = 1e-20
 Identities = 57/136 (41%), Positives = 83/136 (61%), Gaps = 6/136 (4%)
 Frame = -3

Query: 392 HSSGSLVAVNTYFEAPERXXXXXXXXXXXXXPR------KRNQTKREKRSEGSLSTSKVK 231
           HS+GSLVA+++YFEAPE              PR      ++++  RE ++EG +S S + 
Sbjct: 142 HSAGSLVAIDSYFEAPECIAALILIAPAILAPRAVQKLAEQDKVGRENQTEGDISNSNML 201

Query: 230 ENPFAMARNILSKFSTYIAWPIVRMLKGMMNTISSLFRRLLIAFLRSKVAVMLLRMVIDK 51
             PF     IL KF T I   IV+M KGM + ++S++++ L A LRS   VML+RM+IDK
Sbjct: 202 AKPFIKIFKILLKFITVITQAIVQMAKGMTDMLNSIYKKALSAILRSAFGVMLIRMIIDK 261

Query: 50  FGVAAIRNAWYDASQI 3
           FG  A+R AW+D +Q+
Sbjct: 262 FGRGAVRIAWHDPNQV 277


Top