BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038452
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containi...    95   7e-18
ref|XP_002330082.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_003603974.1| Pentatricopeptide repeat-containing protein ...    91   1e-16
ref|XP_002320601.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_003588753.1| Pentatricopeptide repeat-containing protein ...    89   3e-16

>ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
           [Vitis vinifera] gi|297744424|emb|CBI37686.3| unnamed
           protein product [Vitis vinifera]
          Length = 571

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 45/67 (67%), Positives = 49/67 (73%)
 Frame = -2

Query: 249 EKLAVAFALISTKIDTRIHIVKNLRSCEDCHSVMKLISKMYXXXXXXXXXXRFHHFKNGN 70
           EKLAVAF LI T   T I IVKNLRSCEDCHSV+KLISK+Y          RFHHF NG+
Sbjct: 505 EKLAVAFGLIKTSPGTEIRIVKNLRSCEDCHSVLKLISKIYQQDIIVRDRIRFHHFINGD 564

Query: 69  CSCRDYW 49
           CSC+DYW
Sbjct: 565 CSCKDYW 571


>ref|XP_002330082.1| predicted protein [Populus trichocarpa] gi|222871507|gb|EEF08638.1|
           predicted protein [Populus trichocarpa]
          Length = 665

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 40/67 (59%), Positives = 48/67 (71%)
 Frame = -2

Query: 249 EKLAVAFALISTKIDTRIHIVKNLRSCEDCHSVMKLISKMYXXXXXXXXXXRFHHFKNGN 70
           EKLA+AF LI+TK  T IH+VKNLR CEDCHS  KLIS++Y          R+HHFK G 
Sbjct: 599 EKLAIAFGLINTKPGTTIHVVKNLRMCEDCHSAFKLISQVYDREIIVRDRARYHHFKTGT 658

Query: 69  CSCRDYW 49
           CSC+D+W
Sbjct: 659 CSCKDFW 665


>ref|XP_003603974.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355493022|gb|AES74225.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 566

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/67 (62%), Positives = 49/67 (73%)
 Frame = -2

Query: 249 EKLAVAFALISTKIDTRIHIVKNLRSCEDCHSVMKLISKMYXXXXXXXXXXRFHHFKNGN 70
           EKLA+A+ LI T   ++I IVKNLRSCEDCH  MKLISK+Y          RFHHFKNG+
Sbjct: 500 EKLALAYGLIRTCPGSKIRIVKNLRSCEDCHEFMKLISKVYQRDIIVRDRIRFHHFKNGD 559

Query: 69  CSCRDYW 49
           CSC+DYW
Sbjct: 560 CSCKDYW 566


>ref|XP_002320601.1| predicted protein [Populus trichocarpa] gi|222861374|gb|EEE98916.1|
           predicted protein [Populus trichocarpa]
          Length = 629

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 40/67 (59%), Positives = 49/67 (73%)
 Frame = -2

Query: 249 EKLAVAFALISTKIDTRIHIVKNLRSCEDCHSVMKLISKMYXXXXXXXXXXRFHHFKNGN 70
           EK+A+AF LIST+  T + IVKNLR CEDCHS +KL+SK+Y          RFHHF+NG+
Sbjct: 563 EKIAIAFGLISTRPQTPLQIVKNLRVCEDCHSSIKLVSKIYNRKIIVRDRKRFHHFENGS 622

Query: 69  CSCRDYW 49
           CSC DYW
Sbjct: 623 CSCMDYW 629


>ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355477801|gb|AES59004.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 600

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/67 (62%), Positives = 47/67 (70%)
 Frame = -2

Query: 249 EKLAVAFALISTKIDTRIHIVKNLRSCEDCHSVMKLISKMYXXXXXXXXXXRFHHFKNGN 70
           EKLA+AFAL++T   T I IVKNLR CEDCHS  K ISK+Y          RFHHFKNG 
Sbjct: 534 EKLAIAFALLNTPPGTSIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGL 593

Query: 69  CSCRDYW 49
           CSCRD+W
Sbjct: 594 CSCRDFW 600