BLASTX nr result

ID: Coptis23_contig00038433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038433
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777...    63   2e-08
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06

>ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max]
          Length = 1324

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/110 (30%), Positives = 59/110 (53%)
 Frame = +1

Query: 13  KMEEEDLKHRSNCDWYIYGDKCNAYFHNSIKEKKNRRAIWAINELDGTRREGQDQVVAAF 192
           +MEE+ L  R+  DW   GD  N++FH  IK + NRR I+ + + DGT  E Q ++    
Sbjct: 545 EMEEKMLMQRAKVDWIRKGDGNNSFFHAIIKSRNNRRNIYMLQKTDGTLLENQSEIEDEI 604

Query: 193 VGYYKSLLDTESDAVCSRQVLETIDVTVIDASSVQALEADISDSEIKEAL 342
           + +YK L+ TE   +    +    +   ++    + L ++I++ +I+ AL
Sbjct: 605 MDFYKKLMGTEDSQLHHIDIDAMRNGKQVNMEQRRYLVSNITEQDIERAL 654


>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
 Frame = +1

Query: 10  LKMEEEDLKHRSNCDWYIYGDKCNAYFHNSIKEKKNRRAIWAINELDGTRREGQDQVVAA 189
           ++ EE   K ++   W   GD+  +YFH S+  + NR  + ++   DG   EG + V + 
Sbjct: 312 VRAEESFFKQKARIQWLSLGDQNTSYFHKSVNGRHNRNKLLSLTREDGEVVEGHEAVKSE 371

Query: 190 FVGYYKSLLDTES-DAVCSRQVLETIDVTVIDASSVQALEADISDSEIKEALFS 348
            + Y+  +L  +    V + +V+E+     + ++    L   ++  EIK A+FS
Sbjct: 372 VIAYFHRVLGVDQMPRVLNEEVMESAINLKLSSTQQHVLAQVVTRKEIKHAMFS 425


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