BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038411
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522208.1| hypothetical protein RCOM_1732210 [Ricinus c...    62   4e-08
ref|XP_004146631.1| PREDICTED: putative ribonuclease H protein A...    62   6e-08
ref|NP_001174960.1| Os06g0683500 [Oryza sativa Japonica Group] g...    60   2e-07
gb|EEE66235.1| hypothetical protein OsJ_22399 [Oryza sativa Japo...    60   2e-07
ref|XP_002869889.1| At4g21420 [Arabidopsis lyrata subsp. lyrata]...    60   2e-07

>ref|XP_002522208.1| hypothetical protein RCOM_1732210 [Ricinus communis]
           gi|223538579|gb|EEF40183.1| hypothetical protein
           RCOM_1732210 [Ricinus communis]
          Length = 95

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/89 (38%), Positives = 47/89 (52%)
 Frame = -2

Query: 302 PQILECYWFLPPMGIMKISTDGASRGNPGIAGWGVVARNHLDVVCAAGIGGLGVETSYMA 123
           P+I    W  PP   +K++++GA+RG PG  G G + RN   VV    I  L    +++A
Sbjct: 2   PKIFTIKWHPPPPSWIKLNSNGATRGAPGTTGVGGLFRNCRGVVKGCFIVPLSTTYAFVA 61

Query: 122 ECHGIIEGTRRAVEQGWKDIWIESDSQAV 36
           E    I G  +A   GW  IW+ESDS  V
Sbjct: 62  EIKAAIYGIDKAYNFGWNKIWLESDSTYV 90


>ref|XP_004146631.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
           sativus] gi|449488498|ref|XP_004158057.1| PREDICTED:
           putative ribonuclease H protein At1g65750-like [Cucumis
           sativus]
          Length = 205

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
 Frame = -2

Query: 356 SDTILLLKLNLEPR*SRAPQILECYWFLPPMGIMKISTDGASRGN--PGIAGWGVVARNH 183
           S ++LL    L  R    P  +   W  P  G  K++ DG+S+G   PG+A  G V R+H
Sbjct: 15  SKSLLLAARELHKR----PIPIPVAWTRPEFGWTKLNFDGSSKGEIGPGVASIGGVLRDH 70

Query: 182 LDVVCAAGIGGLGVETSYMAECHGIIEGTRRAVEQGWKDIWIESDSQAVVYAFQLNK 12
                      +G   S MAE   + +G    +E GWKD+W+E D++ +V     N+
Sbjct: 71  KAQFLLGYAESIGRAYSSMAELKALTKGLELVLENGWKDVWVEGDAKGLVEILAENR 127


>ref|NP_001174960.1| Os06g0683500 [Oryza sativa Japonica Group]
           gi|52076651|dbj|BAD45551.1| hypothetical protein [Oryza
           sativa Japonica Group] gi|255677331|dbj|BAH93688.1|
           Os06g0683500 [Oryza sativa Japonica Group]
          Length = 240

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/83 (38%), Positives = 44/83 (53%)
 Frame = -2

Query: 281 WFLPPMGIMKISTDGASRGNPGIAGWGVVARNHLDVVCAAGIGGLGVETSYMAECHGIIE 102
           W  P  G MK++ DG+S+ + GIA  G V R+H           +G  TS +AE   +  
Sbjct: 79  WRKPEEGWMKLNFDGSSKHSTGIASIGGVYRDHDGAFLLGYAERIGTATSSVAELAALRR 138

Query: 101 GTRRAVEQGWKDIWIESDSQAVV 33
           G   AV  GW+ +W E DS+AVV
Sbjct: 139 GLELAVRNGWRRVWAEGDSKAVV 161


>gb|EEE66235.1| hypothetical protein OsJ_22399 [Oryza sativa Japonica Group]
          Length = 192

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/83 (38%), Positives = 44/83 (53%)
 Frame = -2

Query: 281 WFLPPMGIMKISTDGASRGNPGIAGWGVVARNHLDVVCAAGIGGLGVETSYMAECHGIIE 102
           W  P  G MK++ DG+S+ + GIA  G V R+H           +G  TS +AE   +  
Sbjct: 45  WRKPEEGWMKLNFDGSSKHSTGIASIGGVYRDHDGAFLLGYAERIGTATSSVAELAALRR 104

Query: 101 GTRRAVEQGWKDIWIESDSQAVV 33
           G   AV  GW+ +W E DS+AVV
Sbjct: 105 GLELAVRNGWRRVWAEGDSKAVV 127


>ref|XP_002869889.1| At4g21420 [Arabidopsis lyrata subsp. lyrata]
           gi|297315725|gb|EFH46148.1| At4g21420 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 201

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 36/114 (31%), Positives = 58/114 (50%)
 Frame = -2

Query: 374 KGTMSSSDTILLLKLNLEPR*SRAPQILECYWFLPPMGIMKISTDGASRGNPGIAGWGVV 195
           +G++ S  T+LL++       +   Q ++  W  P +G +K++ DG SRG  G A  G +
Sbjct: 11  QGSLQSRATLLLIR-------NYHKQPVKVVWKKPQIGWIKLNFDG-SRGREGQASIGGI 62

Query: 194 ARNHLDVVCAAGIGGLGVETSYMAECHGIIEGTRRAVEQGWKDIWIESDSQAVV 33
            RNH           +G  TS MAE   +  G    +E GW DIW+E D++ ++
Sbjct: 63  FRNHKAEFLLGYSESIGEATSTMAEFAALKRGLELVLENGWTDIWLEGDAKIIM 116