BLASTX nr result

ID: Coptis23_contig00038400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038400
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF97863.1| outward-rectifying potassium channel KCO1 [Eucaly...   110   1e-26
ref|XP_002298862.1| outward rectifying potassium channel [Populu...   110   3e-26
ref|XP_002310924.1| outward rectifying potassium channel [Populu...   110   4e-26
ref|XP_003544656.1| PREDICTED: calcium-activated outward-rectify...   109   4e-26
ref|XP_003519630.1| PREDICTED: calcium-activated outward-rectify...   109   6e-26

>gb|AAF97863.1| outward-rectifying potassium channel KCO1 [Eucalyptus
           camaldulensis]
          Length = 348

 Score =  110 bits (276), Expect(2) = 1e-26
 Identities = 55/94 (58%), Positives = 70/94 (74%)
 Frame = -2

Query: 284 KAADYLVEKQEMLLVKALHFHQQVGRIDIMKEIKTNRVKYKXXXXXXXXXXXXXXGTIFL 105
           +AADYLVEKQE+LLVKALH   +VG  +++KEI+TN V+YK              GT FL
Sbjct: 146 RAADYLVEKQEILLVKALHLRNKVGPTEMLKEIETNGVRYKCVTAFILLLLLIVAGTTFL 205

Query: 104 SRVEDLGLVDSFYCVCSTMTSLGYGDKSFSTFGG 3
           + +E+L +VD+FYCVCST+T+LGYGDKSFST GG
Sbjct: 206 ALIENLDIVDAFYCVCSTITTLGYGDKSFSTEGG 239



 Score = 33.9 bits (76), Expect(2) = 1e-26
 Identities = 14/17 (82%), Positives = 17/17 (100%)
 Frame = -3

Query: 334 LACAFVFTGMALVGLVL 284
           LACAFVF+GMA+VGL+L
Sbjct: 128 LACAFVFSGMAIVGLIL 144


>ref|XP_002298862.1| outward rectifying potassium channel [Populus trichocarpa]
           gi|222846120|gb|EEE83667.1| outward rectifying potassium
           channel [Populus trichocarpa]
          Length = 316

 Score =  110 bits (276), Expect(2) = 3e-26
 Identities = 56/94 (59%), Positives = 68/94 (72%)
 Frame = -2

Query: 284 KAADYLVEKQEMLLVKALHFHQQVGRIDIMKEIKTNRVKYKXXXXXXXXXXXXXXGTIFL 105
           KAADYLVEKQE+LL+KAL  HQ++     +KEI+TN+VKYK              GTIFL
Sbjct: 120 KAADYLVEKQEILLIKALRMHQKLDPAAFLKEIETNKVKYKCYLAIIILSVLMLVGTIFL 179

Query: 104 SRVEDLGLVDSFYCVCSTMTSLGYGDKSFSTFGG 3
             VEDL ++D+FYCVCST+T+LGYGDKSFST  G
Sbjct: 180 YMVEDLDIIDAFYCVCSTVTTLGYGDKSFSTVYG 213



 Score = 32.3 bits (72), Expect(2) = 3e-26
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -3

Query: 334 LACAFVFTGMALVGLVL 284
           LAC FVFTGM L+GL+L
Sbjct: 102 LACVFVFTGMLLIGLIL 118


>ref|XP_002310924.1| outward rectifying potassium channel [Populus trichocarpa]
           gi|222850744|gb|EEE88291.1| outward rectifying potassium
           channel [Populus trichocarpa]
          Length = 354

 Score =  110 bits (274), Expect(2) = 4e-26
 Identities = 54/94 (57%), Positives = 69/94 (73%)
 Frame = -2

Query: 284 KAADYLVEKQEMLLVKALHFHQQVGRIDIMKEIKTNRVKYKXXXXXXXXXXXXXXGTIFL 105
           KAADYLV+KQE+LL+KALH H++ G    +KEI+T++VKYK              GT+FL
Sbjct: 148 KAADYLVDKQEILLIKALHKHEKPGPAASLKEIETSKVKYKCYLALAILSVLMLVGTVFL 207

Query: 104 SRVEDLGLVDSFYCVCSTMTSLGYGDKSFSTFGG 3
             VEDL ++D+FYCVC T+T+LGYGDKSFST GG
Sbjct: 208 YMVEDLNIIDAFYCVCCTITTLGYGDKSFSTGGG 241



 Score = 32.7 bits (73), Expect(2) = 4e-26
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -3

Query: 334 LACAFVFTGMALVGLVL 284
           LAC FVF GMALVGL+L
Sbjct: 130 LACVFVFVGMALVGLIL 146


>ref|XP_003544656.1| PREDICTED: calcium-activated outward-rectifying potassium channel
           1-like isoform 1 [Glycine max]
           gi|356552609|ref|XP_003544657.1| PREDICTED:
           calcium-activated outward-rectifying potassium channel
           1-like isoform 2 [Glycine max]
          Length = 348

 Score =  109 bits (273), Expect(2) = 4e-26
 Identities = 53/94 (56%), Positives = 69/94 (73%)
 Frame = -2

Query: 284 KAADYLVEKQEMLLVKALHFHQQVGRIDIMKEIKTNRVKYKXXXXXXXXXXXXXXGTIFL 105
           KAADYLVEKQE+LLVKA+  HQ+VG  +I++E++TN+ +YK              GTIFL
Sbjct: 146 KAADYLVEKQELLLVKAMRMHQKVGSTEILREVQTNKTRYKLFLVFFLLLILIIAGTIFL 205

Query: 104 SRVEDLGLVDSFYCVCSTMTSLGYGDKSFSTFGG 3
             VE L ++D+FYCVCST+T+LGYGD+SFST  G
Sbjct: 206 VTVEKLDVIDAFYCVCSTITTLGYGDQSFSTQAG 239



 Score = 33.1 bits (74), Expect(2) = 4e-26
 Identities = 13/17 (76%), Positives = 17/17 (100%)
 Frame = -3

Query: 334 LACAFVFTGMALVGLVL 284
           LACAFVF+GMAL+GL++
Sbjct: 128 LACAFVFSGMALIGLIV 144


>ref|XP_003519630.1| PREDICTED: calcium-activated outward-rectifying potassium channel
           1-like [Glycine max]
          Length = 349

 Score =  109 bits (272), Expect(2) = 6e-26
 Identities = 52/94 (55%), Positives = 69/94 (73%)
 Frame = -2

Query: 284 KAADYLVEKQEMLLVKALHFHQQVGRIDIMKEIKTNRVKYKXXXXXXXXXXXXXXGTIFL 105
           KAADYLVEKQE+LLVKA+  HQ++G  +I++E++TN+ +YK              GTIFL
Sbjct: 147 KAADYLVEKQELLLVKAMRMHQKIGSTEILREVETNKTRYKLFLVFSLLLILIIVGTIFL 206

Query: 104 SRVEDLGLVDSFYCVCSTMTSLGYGDKSFSTFGG 3
             VE L ++D+FYCVCST+T+LGYGD+SFST  G
Sbjct: 207 VTVEKLDVIDAFYCVCSTITTLGYGDQSFSTQAG 240



 Score = 33.1 bits (74), Expect(2) = 6e-26
 Identities = 13/17 (76%), Positives = 17/17 (100%)
 Frame = -3

Query: 334 LACAFVFTGMALVGLVL 284
           LACAFVF+GMAL+GL++
Sbjct: 129 LACAFVFSGMALIGLIV 145


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