BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038389
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containi...   158   5e-37
emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]   158   5e-37
ref|XP_002523384.1| pentatricopeptide repeat-containing protein,...   151   6e-35
ref|XP_002303975.1| predicted protein [Populus trichocarpa] gi|2...   146   1e-33
ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containi...   139   3e-31

>ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
           [Vitis vinifera]
          Length = 576

 Score =  158 bits (399), Expect = 5e-37
 Identities = 74/101 (73%), Positives = 87/101 (86%)
 Frame = -2

Query: 307 LGRAGYLREAHELVREMPFEPNGAIWGSLLAASRVHGDVELGECALRHLIEVEPHNSGNY 128
           LGRAG+L+EA ELVR MPFE N  IWGSLLAA+R+HGD ELG+ AL+HLI+VEPHNSGNY
Sbjct: 418 LGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAELGKQALQHLIKVEPHNSGNY 477

Query: 127 TILSNIYAAFGRWHEVGIVRKAMRDKGVKKMPGGSSIELNS 5
           T+LSNIYA   +W+E G+VRK MRD GVKKMPGGS IE+N+
Sbjct: 478 TLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCIEVNN 518


>emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
          Length = 576

 Score =  158 bits (399), Expect = 5e-37
 Identities = 74/101 (73%), Positives = 87/101 (86%)
 Frame = -2

Query: 307 LGRAGYLREAHELVREMPFEPNGAIWGSLLAASRVHGDVELGECALRHLIEVEPHNSGNY 128
           LGRAG+L+EA ELVR MPFE N  IWGSLLAA+R+HGD ELG+ AL+HLI+VEPHNSGNY
Sbjct: 418 LGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAELGKQALQHLIKVEPHNSGNY 477

Query: 127 TILSNIYAAFGRWHEVGIVRKAMRDKGVKKMPGGSSIELNS 5
           T+LSNIYA   +W+E G+VRK MRD GVKKMPGGS IE+N+
Sbjct: 478 TLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCIEVNN 518


>ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537334|gb|EEF38963.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 538

 Score =  151 bits (381), Expect = 6e-35
 Identities = 71/101 (70%), Positives = 85/101 (84%)
 Frame = -2

Query: 307 LGRAGYLREAHELVREMPFEPNGAIWGSLLAASRVHGDVELGECALRHLIEVEPHNSGNY 128
           LGRAGYL+EA +L+++MPFEPN AIWGSLLAAS  HGD  LGE  L+HLIE+EP+NSGNY
Sbjct: 390 LGRAGYLQEAQQLLQQMPFEPNAAIWGSLLAASYTHGDAMLGERTLKHLIELEPNNSGNY 449

Query: 127 TILSNIYAAFGRWHEVGIVRKAMRDKGVKKMPGGSSIELNS 5
            +LSNIYA+ GRW    IVRK MRD+GVKK+PGGS IE+N+
Sbjct: 450 ALLSNIYASLGRWKASRIVRKMMRDRGVKKIPGGSFIEVNN 490


>ref|XP_002303975.1| predicted protein [Populus trichocarpa] gi|222841407|gb|EEE78954.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score =  146 bits (369), Expect = 1e-33
 Identities = 69/101 (68%), Positives = 82/101 (81%)
 Frame = -2

Query: 307 LGRAGYLREAHELVREMPFEPNGAIWGSLLAASRVHGDVELGECALRHLIEVEPHNSGNY 128
           LGRAG+L+EA  L+ +MPFEPN  IWGSLLAA   HGD ELGE AL+HL+E+EP NSGNY
Sbjct: 362 LGRAGHLKEAQTLLAQMPFEPNAVIWGSLLAACNTHGDPELGELALQHLLELEPDNSGNY 421

Query: 127 TILSNIYAAFGRWHEVGIVRKAMRDKGVKKMPGGSSIELNS 5
            +LSNIYA+ GRW+E  +VRK M D GVKKMPGGS IE+N+
Sbjct: 422 ALLSNIYASRGRWNESRVVRKVMWDAGVKKMPGGSLIEVNN 462


>ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Brachypodium distachyon]
          Length = 500

 Score =  139 bits (349), Expect = 3e-31
 Identities = 64/102 (62%), Positives = 83/102 (81%)
 Frame = -2

Query: 307 LGRAGYLREAHELVREMPFEPNGAIWGSLLAASRVHGDVELGECALRHLIEVEPHNSGNY 128
           LGRAGYL EA +LV++MPF+ N AIWG+LLAA+R HGD ELG+ AL HLIE+EPHNSGNY
Sbjct: 349 LGRAGYLMEAQDLVQDMPFKANAAIWGALLAAARTHGDAELGKQALLHLIELEPHNSGNY 408

Query: 127 TILSNIYAAFGRWHEVGIVRKAMRDKGVKKMPGGSSIELNSV 2
            +LSNIYA   RW +V  +RK M+D+G++ +PG SSIE++ +
Sbjct: 409 ILLSNIYAEQERWDDVSKLRKQMKDRGLRNVPGASSIEVDGM 450