BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038387
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    75   4e-12
ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containi...    75   4e-12
emb|CBI24253.3| unnamed protein product [Vitis vinifera]               75   6e-12
ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containi...    75   6e-12
ref|XP_002313262.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11

>ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/71 (49%), Positives = 47/71 (66%)
 Frame = +2

Query: 2   INGLCKLKMFEQALGLLRFDMVESNCCPDVKTYTDLMDGLCKDGRVDEGISLFDEMQERG 181
           INGLCK K  ++A+ LLR +M+  N  PD  TY  L+DGLCK GR+   ++L +EM  RG
Sbjct: 260 INGLCKCKRVDEAMNLLR-EMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRG 318

Query: 182 LSADVFAYTTI 214
             ADV  YT++
Sbjct: 319 QPADVVTYTSL 329



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/71 (39%), Positives = 42/71 (59%)
 Frame = +2

Query: 2   INGLCKLKMFEQALGLLRFDMVESNCCPDVKTYTDLMDGLCKDGRVDEGISLFDEMQERG 181
           I+GLCK      AL L+  +M       DV TYT L+D LCK+  +D+  +LF +M+ERG
Sbjct: 295 IDGLCKSGRITSALNLMN-EMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERG 353

Query: 182 LSADVFAYTTI 214
           +   ++ YT +
Sbjct: 354 IQPTMYTYTAL 364


>ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/71 (49%), Positives = 47/71 (66%)
 Frame = +2

Query: 2   INGLCKLKMFEQALGLLRFDMVESNCCPDVKTYTDLMDGLCKDGRVDEGISLFDEMQERG 181
           INGLCK K  ++A+ LLR +M+  N  PD  TY  L+DGLCK GR+   ++L +EM  RG
Sbjct: 297 INGLCKCKRVDEAMNLLR-EMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRG 355

Query: 182 LSADVFAYTTI 214
             ADV  YT++
Sbjct: 356 QPADVVTYTSL 366



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
 Frame = +2

Query: 2   INGLCKLKMFEQALGLLRFDMVESNCC-PDVKTYTDLMDGLCKDGRVDEGISLFDEMQER 178
           +NGLCK+     A+ LLR  M+E     P+V  Y  ++DGLCKD  V+E   L+ EM  R
Sbjct: 122 LNGLCKIGETRCAVKLLR--MIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDAR 179

Query: 179 GLSADVFAYTTI 214
           G+  D   YTT+
Sbjct: 180 GIFPDAITYTTL 191



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/71 (39%), Positives = 42/71 (59%)
 Frame = +2

Query: 2   INGLCKLKMFEQALGLLRFDMVESNCCPDVKTYTDLMDGLCKDGRVDEGISLFDEMQERG 181
           I+GLCK      AL L+  +M       DV TYT L+D LCK+  +D+  +LF +M+ERG
Sbjct: 332 IDGLCKSGRITSALNLMN-EMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERG 390

Query: 182 LSADVFAYTTI 214
           +   ++ YT +
Sbjct: 391 IQPTMYTYTAL 401


>emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/71 (50%), Positives = 49/71 (69%)
 Frame = +2

Query: 2   INGLCKLKMFEQALGLLRFDMVESNCCPDVKTYTDLMDGLCKDGRVDEGISLFDEMQERG 181
           INGLCK K  ++A+GLL  +M  + C P+  T T LMDGLCKDGR+DE + L + M+++G
Sbjct: 40  INGLCKAKKLKEAVGLL-LEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKG 98

Query: 182 LSADVFAYTTI 214
             ADV  Y T+
Sbjct: 99  FDADVVLYGTL 109


>ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/71 (50%), Positives = 49/71 (69%)
 Frame = +2

Query: 2   INGLCKLKMFEQALGLLRFDMVESNCCPDVKTYTDLMDGLCKDGRVDEGISLFDEMQERG 181
           INGLCK K  ++A+GLL  +M  + C P+  T T LMDGLCKDGR+DE + L + M+++G
Sbjct: 186 INGLCKAKKLKEAVGLL-LEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKG 244

Query: 182 LSADVFAYTTI 214
             ADV  Y T+
Sbjct: 245 FDADVVLYGTL 255


>ref|XP_002313262.1| predicted protein [Populus trichocarpa] gi|222849670|gb|EEE87217.1|
           predicted protein [Populus trichocarpa]
          Length = 559

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/71 (52%), Positives = 49/71 (69%)
 Frame = +2

Query: 2   INGLCKLKMFEQALGLLRFDMVESNCCPDVKTYTDLMDGLCKDGRVDEGISLFDEMQERG 181
           INGLCK K  E+A+ LL  +M  S+C P+  TY  LMDGLCK+GRV+E + L  EM+ +G
Sbjct: 17  INGLCKEKRLEKAVDLL-VEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKG 75

Query: 182 LSADVFAYTTI 214
           L  DV  Y+T+
Sbjct: 76  LEVDVVVYSTL 86



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/71 (40%), Positives = 39/71 (54%)
 Frame = +2

Query: 2   INGLCKLKMFEQALGLLRFDMVESNCCPDVKTYTDLMDGLCKDGRVDEGISLFDEMQERG 181
           ING CK  ++ +A  +L   M E    PDV TYT ++ GLCKDGR  + + LFD M E+G
Sbjct: 122 INGFCKKGLWREATAVLH-TMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 182 LSADVFAYTTI 214
                  Y  +
Sbjct: 181 EEPSTVTYNVL 191