BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038365
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containi...   153   1e-35
emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]   153   1e-35
ref|XP_002527042.1| pentatricopeptide repeat-containing protein,...   137   9e-31
ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containi...   137   1e-30
ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30

>ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  153 bits (387), Expect = 1e-35
 Identities = 70/99 (70%), Positives = 85/99 (85%)
 Frame = -2

Query: 298 FDLAICLFNEMPEKDVPSWNTVISCYYQDGQPEKVLDMFERMKSLGFEPDSVTFTTVFSA 119
           F+ AI LF+EMPE+DV SWN VISCYYQDGQPEK L++FE MK  GF+PDSVT TTV S+
Sbjct: 157 FEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISS 216

Query: 118 CTKLSELDRGRKIHEDLVRSGFVLDGYISSALVDMYGKC 2
           C +L +L+RG++IH +LVRSGF LDG++SSALVDMYGKC
Sbjct: 217 CARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKC 255



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 36/93 (38%), Positives = 61/93 (65%)
 Frame = -2

Query: 280 LFNEMPEKDVPSWNTVISCYYQDGQPEKVLDMFERMKSLGFEPDSVTFTTVFSACTKLSE 101
           +F  MP+ +V SWN +IS Y + G   + L +F  M+  G +PD++TFT+V  AC++L+ 
Sbjct: 365 VFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAV 424

Query: 100 LDRGRKIHEDLVRSGFVLDGYISSALVDMYGKC 2
           L++G++IH  ++ S   ++  +  AL+DMY KC
Sbjct: 425 LEKGKEIHNFIIESKLEINEVVMGALLDMYAKC 457



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/98 (30%), Positives = 58/98 (59%)
 Frame = -2

Query: 295 DLAICLFNEMPEKDVPSWNTVISCYYQDGQPEKVLDMFERMKSLGFEPDSVTFTTVFSAC 116
           ++A  +F ++  K+V SWN++I+ Y   G  +  +++F RM   G  P   T +++  AC
Sbjct: 259 EMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMAC 318

Query: 115 TKLSELDRGRKIHEDLVRSGFVLDGYISSALVDMYGKC 2
           ++   L  G+ IH  ++R+    D +++S+L+D+Y KC
Sbjct: 319 SRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKC 356



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
 Frame = -2

Query: 295 DLAICLFNEMPEKDVPSWNTVISCYYQDGQPEKVLDMFERMKSLGFEPDSVTFTTVFSAC 116
           D A+ +FN++PE+D  SW ++I+ Y   GQ  + L +FE+M+    +PD VTF  + SAC
Sbjct: 461 DEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSAC 520

Query: 115 TKLSELDRGRKIHEDLVRS-GFVLDGYISSALVDMYGK 5
           +    +D G      ++   GF       S L+D+ G+
Sbjct: 521 SHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGR 558



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/86 (29%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
 Frame = -2

Query: 256 DVPSWNTVISCYYQDGQPEKVLDMFERMKSLGF-EPDSVTFTTVFSACTKLSELDRGRKI 80
           D+  WN +++   ++    + L++F R+    + +PD+ T+ +V  AC+ L  +  G+ +
Sbjct: 69  DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMV 128

Query: 79  HEDLVRSGFVLDGYISSALVDMYGKC 2
           H  +++SGF +D  + S+ V MY KC
Sbjct: 129 HTHVIKSGFAMDVVVMSSAVGMYAKC 154


>emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  153 bits (387), Expect = 1e-35
 Identities = 70/99 (70%), Positives = 85/99 (85%)
 Frame = -2

Query: 298 FDLAICLFNEMPEKDVPSWNTVISCYYQDGQPEKVLDMFERMKSLGFEPDSVTFTTVFSA 119
           F+ AI LF+EMPE+DV SWN VISCYYQDGQPEK L++FE MK  GF+PDSVT TTV S+
Sbjct: 349 FEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISS 408

Query: 118 CTKLSELDRGRKIHEDLVRSGFVLDGYISSALVDMYGKC 2
           C +L +L+RG++IH +LVRSGF LDG++SSALVDMYGKC
Sbjct: 409 CARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKC 447



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 36/93 (38%), Positives = 61/93 (65%)
 Frame = -2

Query: 280 LFNEMPEKDVPSWNTVISCYYQDGQPEKVLDMFERMKSLGFEPDSVTFTTVFSACTKLSE 101
           +F  MP+ +V SWN +IS Y + G   + L +F  M+  G +PD++TFT+V  AC++L+ 
Sbjct: 557 VFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAV 616

Query: 100 LDRGRKIHEDLVRSGFVLDGYISSALVDMYGKC 2
           L++G++IH  ++ S   ++  +  AL+DMY KC
Sbjct: 617 LEKGKEIHNFIIESKLEINEVVMGALLDMYAKC 649



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/98 (30%), Positives = 58/98 (59%)
 Frame = -2

Query: 295 DLAICLFNEMPEKDVPSWNTVISCYYQDGQPEKVLDMFERMKSLGFEPDSVTFTTVFSAC 116
           ++A  +F ++  K+V SWN++I+ Y   G  +  +++F RM   G  P   T +++  AC
Sbjct: 451 EMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMAC 510

Query: 115 TKLSELDRGRKIHEDLVRSGFVLDGYISSALVDMYGKC 2
           ++   L  G+ IH  ++R+    D +++S+L+D+Y KC
Sbjct: 511 SRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKC 548



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
 Frame = -2

Query: 295 DLAICLFNEMPEKDVPSWNTVISCYYQDGQPEKVLDMFERMKSLGFEPDSVTFTTVFSAC 116
           D A+ +FN++PE+D  SW ++I+ Y   GQ  + L +FE+M+    +PD VTF  + SAC
Sbjct: 653 DEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSAC 712

Query: 115 TKLSELDRGRKIHEDLVRS-GFVLDGYISSALVDMYGK 5
           +    +D G      ++   GF       S L+D+ G+
Sbjct: 713 SHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGR 750



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/86 (29%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
 Frame = -2

Query: 256 DVPSWNTVISCYYQDGQPEKVLDMFERMKSLGF-EPDSVTFTTVFSACTKLSELDRGRKI 80
           D+  WN +++   ++    + L++F R+    + +PD+ T+ +V  AC+ L  +  G+ +
Sbjct: 261 DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMV 320

Query: 79  HEDLVRSGFVLDGYISSALVDMYGKC 2
           H  +++SGF +D  + S+ V MY KC
Sbjct: 321 HTHVIKSGFAMDVVVMSSAVGMYAKC 346


>ref|XP_002527042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533604|gb|EEF35342.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 520

 Score =  137 bits (345), Expect = 9e-31
 Identities = 61/98 (62%), Positives = 81/98 (82%)
 Frame = -2

Query: 298 FDLAICLFNEMPEKDVPSWNTVISCYYQDGQPEKVLDMFERMKSLGFEPDSVTFTTVFSA 119
           F  AI LF+EMPE+DV  WNTVISCYYQDG+ EK L+MF +M+  GFEP+SVT TTV S+
Sbjct: 81  FGYAIQLFDEMPERDVACWNTVISCYYQDGKAEKALEMFGKMRDSGFEPNSVTLTTVISS 140

Query: 118 CTKLSELDRGRKIHEDLVRSGFVLDGYISSALVDMYGK 5
           C +L +L+RG++IH +++++G VLDG++ SALVDMYGK
Sbjct: 141 CARLLDLERGKEIHREVMQNGMVLDGFVGSALVDMYGK 178



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 35/93 (37%), Positives = 60/93 (64%)
 Frame = -2

Query: 280 LFNEMPEKDVPSWNTVISCYYQDGQPEKVLDMFERMKSLGFEPDSVTFTTVFSACTKLSE 101
           +F  +P+ +V  WN +IS Y   G   K LDM++ MK    +PD+VTF+++ SAC++L+ 
Sbjct: 289 IFYMLPKANVVLWNVMISGYVTIGDYVKALDMYDEMKIASVKPDAVTFSSILSACSQLAA 348

Query: 100 LDRGRKIHEDLVRSGFVLDGYISSALVDMYGKC 2
           L++G++IH  + ++    +  +  AL+DMY KC
Sbjct: 349 LEKGKEIHNCITKNDLETNEIVMGALLDMYAKC 381



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/98 (34%), Positives = 60/98 (61%)
 Frame = -2

Query: 295 DLAICLFNEMPEKDVPSWNTVISCYYQDGQPEKVLDMFERMKSLGFEPDSVTFTTVFSAC 116
           DLA  +F +MP+K + +WN++I+ Y      ++ +++F RM   G +P   T +++  AC
Sbjct: 183 DLAKDIFEQMPKKTLVAWNSLIAGYSSAADSKECIELFWRMNMEGTKPTVTTLSSILLAC 242

Query: 115 TKLSELDRGRKIHEDLVRSGFVLDGYISSALVDMYGKC 2
           ++ + L  GR IH   VR+   LD ++SS L+++Y KC
Sbjct: 243 SRAAHLQHGRFIHGYAVRNRVQLDIFVSSGLIELYFKC 280



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
 Frame = -2

Query: 295 DLAICLFNEMPEKDVPSWNTVISCYYQDGQPEKVLDMFERMKSLGFEPDSVTFTTVFSAC 116
           D A+ +FN++PE+D+ SW ++IS Y   GQ  + L +FE ++     PD+VTF  V SAC
Sbjct: 385 DEALSVFNKLPERDLLSWTSIISAYGSHGQALEALRLFEELQQSKASPDAVTFLAVLSAC 444

Query: 115 TKLSELDRGRKIHEDLVRSGFVLDGYIS-SALVDMYGK 5
           +    +D+G      ++ +  +  G    S L+D+ G+
Sbjct: 445 SHAGLVDKGYYYFNQMITNYGIKPGLEHYSCLIDLLGR 482



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/78 (35%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
 Frame = -2

Query: 232 ISCYYQDGQPEKVLDMFERMKSLGF-EPDSVTFTTVFSACTKLSELDRGRKIHEDLVRSG 56
           ++ Y ++    + L++F+R+    + +PDS T+ +V  AC  L   D GR IH  L++SG
Sbjct: 1   MAAYTKNCMYTEALELFDRLLQYPYLQPDSFTYPSVLKACGGLGRYDYGRMIHTHLIKSG 60

Query: 55  FVLDGYISSALVDMYGKC 2
           FV D  ++S+LV ++ KC
Sbjct: 61  FVFDIVVASSLVSLHAKC 78


>ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  137 bits (344), Expect = 1e-30
 Identities = 63/99 (63%), Positives = 78/99 (78%)
 Frame = -2

Query: 298 FDLAICLFNEMPEKDVPSWNTVISCYYQDGQPEKVLDMFERMKSLGFEPDSVTFTTVFSA 119
           F+ AI LFNEMPEKDV  WNTVISCYYQ G  ++ L+ F  M+  GFEP+SVT TT  S+
Sbjct: 157 FEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISS 216

Query: 118 CTKLSELDRGRKIHEDLVRSGFVLDGYISSALVDMYGKC 2
           C +L +L+RG +IHE+L+ SGF+LD +ISSALVDMYGKC
Sbjct: 217 CARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKC 255



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 36/98 (36%), Positives = 61/98 (62%)
 Frame = -2

Query: 295 DLAICLFNEMPEKDVPSWNTVISCYYQDGQPEKVLDMFERMKSLGFEPDSVTFTTVFSAC 116
           +LA  +F  +P+  V SWN +IS Y  +G+  + L +F  M+    EPD++TFT+V +AC
Sbjct: 360 ELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTAC 419

Query: 115 TKLSELDRGRKIHEDLVRSGFVLDGYISSALVDMYGKC 2
           ++L+ L++G +IH  ++      +  +  AL+DMY KC
Sbjct: 420 SQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKC 457



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/98 (32%), Positives = 60/98 (61%)
 Frame = -2

Query: 295 DLAICLFNEMPEKDVPSWNTVISCYYQDGQPEKVLDMFERMKSLGFEPDSVTFTTVFSAC 116
           ++AI +F +MP+K V +WN++IS Y   G     + +F+RM + G +P   T +++   C
Sbjct: 259 EMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVC 318

Query: 115 TKLSELDRGRKIHEDLVRSGFVLDGYISSALVDMYGKC 2
           ++ + L  G+ +H   +R+    D +I+S+L+D+Y KC
Sbjct: 319 SRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKC 356



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/101 (32%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
 Frame = -2

Query: 298 FDLAICLFNEMPEK-DVPSWNTVISCYYQDGQPEKVLDMFERMKSLGF-EPDSVTFTTVF 125
           +D A C+F+ M    ++  WN +++ Y ++    + L++FE++    + +PDS T+ +V 
Sbjct: 54  YDHAKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVL 113

Query: 124 SACTKLSELDRGRKIHEDLVRSGFVLDGYISSALVDMYGKC 2
            AC  L +   G+ IH  LV++G ++D  + S+LV MY KC
Sbjct: 114 KACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKC 154


>ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  136 bits (342), Expect = 2e-30
 Identities = 63/99 (63%), Positives = 77/99 (77%)
 Frame = -2

Query: 298 FDLAICLFNEMPEKDVPSWNTVISCYYQDGQPEKVLDMFERMKSLGFEPDSVTFTTVFSA 119
           F+ AI LFNEMPEKDV  WNTVISCYYQ G  +  L+ F  M+  GFEP+SVT TT  S+
Sbjct: 157 FEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISS 216

Query: 118 CTKLSELDRGRKIHEDLVRSGFVLDGYISSALVDMYGKC 2
           C +L +L+RG +IHE+L+ SGF+LD +ISSALVDMYGKC
Sbjct: 217 CARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKC 255



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/98 (35%), Positives = 61/98 (62%)
 Frame = -2

Query: 295 DLAICLFNEMPEKDVPSWNTVISCYYQDGQPEKVLDMFERMKSLGFEPDSVTFTTVFSAC 116
           +LA  +F  +P+  V SWN +IS Y  +G+  + L +F  M+    E D++TFT+V +AC
Sbjct: 360 ELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTAC 419

Query: 115 TKLSELDRGRKIHEDLVRSGFVLDGYISSALVDMYGKC 2
           ++L+ L++G++IH  ++      +  +  AL+DMY KC
Sbjct: 420 SQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKC 457



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/98 (31%), Positives = 60/98 (61%)
 Frame = -2

Query: 295 DLAICLFNEMPEKDVPSWNTVISCYYQDGQPEKVLDMFERMKSLGFEPDSVTFTTVFSAC 116
           ++AI +F +MP+K V +WN++IS Y   G     + +F+RM + G +P   T +++   C
Sbjct: 259 EMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVC 318

Query: 115 TKLSELDRGRKIHEDLVRSGFVLDGYISSALVDMYGKC 2
           ++ + L  G+ +H   +R+    D +++S+L+D+Y KC
Sbjct: 319 SRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKC 356



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/101 (33%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
 Frame = -2

Query: 298 FDLAICLFNEMPEK-DVPSWNTVISCYYQDGQPEKVLDMFERMKSLGF-EPDSVTFTTVF 125
           +D A C+F+ M    ++  WN +++ Y ++    + L++FE++    + +PDS T+ +VF
Sbjct: 54  YDHAKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVF 113

Query: 124 SACTKLSELDRGRKIHEDLVRSGFVLDGYISSALVDMYGKC 2
            AC  L     G+ IH  L+++G ++D  + S+LV MYGKC
Sbjct: 114 KACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKC 154