BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038364
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511627.1| pentatricopeptide repeat-containing protein,...   210   1e-52
ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containi...   201   5e-50
ref|XP_002326829.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-48
ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containi...   182   2e-44
ref|XP_003622527.1| Pentatricopeptide repeat-containing protein ...   179   3e-43

>ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548807|gb|EEF50296.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1163

 Score =  210 bits (534), Expect = 1e-52
 Identities = 105/166 (63%), Positives = 129/166 (77%)
 Frame = +1

Query: 1    VEIYESLIEGFLQKNEPNFALKTLEKMLKSAHHPRTSTFHSILAAFVKESCAREAASLVM 180
            +E Y+SLI+G LQK EP  A +TLEKM+KS+H P TSTFHSILA  + + CA E+A  +M
Sbjct: 516  LETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARLLAKGCAHESARFIM 575

Query: 181  LMLERKIRQNINLSTDTVVVLFKSGLRDSAFEIVRLLHDNGYFTKMEEVVGFLCRSRKYL 360
            LMLE KIRQNINLST TV +LF SGLRD AF+IV LL+ NGY   MEE++GFL  +RK+L
Sbjct: 576  LMLEGKIRQNINLSTHTVRLLFGSGLRDKAFKIVGLLYANGYVVDMEELIGFLSHNRKFL 635

Query: 361  EAREMLLFCLENHQNVGVEMYNKVITGLCKTKRAAEAFSLYYELIE 498
             A ++LLFCLE HQNV ++M + VI GLCK KR +EAF LYYEL+E
Sbjct: 636  LAHKLLLFCLEKHQNVDIDMCDTVIEGLCKMKRHSEAFGLYYELVE 681


>ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Vitis vinifera]
          Length = 746

 Score =  201 bits (511), Expect = 5e-50
 Identities = 100/165 (60%), Positives = 131/165 (79%)
 Frame = +1

Query: 4    EIYESLIEGFLQKNEPNFALKTLEKMLKSAHHPRTSTFHSILAAFVKESCAREAASLVML 183
            E Y  +I+G L+K +P  A K+LEKMLKS+H P T+ FHSILAA V++ CA E+ASLV L
Sbjct: 526  ETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKL 585

Query: 184  MLERKIRQNINLSTDTVVVLFKSGLRDSAFEIVRLLHDNGYFTKMEEVVGFLCRSRKYLE 363
            MLER+IRQNI+LST TV +L+KSGL+D AF  + LL++NGY  KMEE+V FLC+SRK LE
Sbjct: 586  MLERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYENGYLVKMEELVSFLCQSRKLLE 645

Query: 364  AREMLLFCLENHQNVGVEMYNKVITGLCKTKRAAEAFSLYYELIE 498
            A++MLLF LE  Q+V ++M + VI+GLCK  + +EAF+LYYEL+E
Sbjct: 646  AQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVE 690


>ref|XP_002326829.1| predicted protein [Populus trichocarpa] gi|222835144|gb|EEE73579.1|
           predicted protein [Populus trichocarpa]
          Length = 664

 Score =  196 bits (498), Expect = 2e-48
 Identities = 99/165 (60%), Positives = 124/165 (75%)
 Frame = +1

Query: 4   EIYESLIEGFLQKNEPNFALKTLEKMLKSAHHPRTSTFHSILAAFVKESCAREAASLVML 183
           E Y  LI GFLQK EP  A KTLE+MLKS++ P+TS FHSIL+  +K   ARE+AS V+L
Sbjct: 458 ETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELLKNDFARESASFVVL 517

Query: 184 MLERKIRQNINLSTDTVVVLFKSGLRDSAFEIVRLLHDNGYFTKMEEVVGFLCRSRKYLE 363
           M++RKIRQNINLST T+ +LF SGLR  AF+IV LL+DNGY   MEE++GF+C++ K L+
Sbjct: 518 MIDRKIRQNINLSTHTMRLLFGSGLRIKAFQIVELLYDNGYMVDMEELIGFICQNGKLLD 577

Query: 364 AREMLLFCLENHQNVGVEMYNKVITGLCKTKRAAEAFSLYYELIE 498
           A++ML FCLE   NV + + N VI GLCK KR  EAF LYY L+E
Sbjct: 578 AQKMLSFCLEKGHNVDINVCNVVIEGLCKMKRPLEAFGLYYMLVE 622


>ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Glycine max]
          Length = 729

 Score =  182 bits (462), Expect = 2e-44
 Identities = 86/166 (51%), Positives = 126/166 (75%)
 Frame = +1

Query: 1    VEIYESLIEGFLQKNEPNFALKTLEKMLKSAHHPRTSTFHSILAAFVKESCAREAASLVM 180
            +EIY+ LI+GFLQK++P  A +TLEKMLKS++ P+TST+HS+LA  +++ CA E++ +++
Sbjct: 508  IEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKLLEKGCAHESSCVIV 567

Query: 181  LMLERKIRQNINLSTDTVVVLFKSGLRDSAFEIVRLLHDNGYFTKMEEVVGFLCRSRKYL 360
            +MLE+ +RQNINLST+++ +LF     + AFEI+ LL+ NGY+ K+EEV  FL +  K  
Sbjct: 568  MMLEKNVRQNINLSTESLQLLFGREQHERAFEIINLLYKNGYYVKIEEVAQFLLKRGKLS 627

Query: 361  EAREMLLFCLENHQNVGVEMYNKVITGLCKTKRAAEAFSLYYELIE 498
            EA ++LLF LENHQNV +++ N  I  LCK  + +EAFSL YEL+E
Sbjct: 628  EACKLLLFSLENHQNVDIDLCNATILNLCKINKVSEAFSLCYELVE 673


>ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355497542|gb|AES78745.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 721

 Score =  179 bits (453), Expect = 3e-43
 Identities = 85/166 (51%), Positives = 126/166 (75%)
 Frame = +1

Query: 1    VEIYESLIEGFLQKNEPNFALKTLEKMLKSAHHPRTSTFHSILAAFVKESCAREAASLVM 180
            ++IY+ LI+GFL+K++P  A +TLEKMLKS++ P+TST+HSIL   +++ C  E+A +++
Sbjct: 515  IDIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQTSTWHSILNRLLEQGCVHESAGVIV 574

Query: 181  LMLERKIRQNINLSTDTVVVLFKSGLRDSAFEIVRLLHDNGYFTKMEEVVGFLCRSRKYL 360
            +MLER IRQNIN ST  + +LF  GL+D AF+I  L++ NG+  KM+EVV FLC  R+ L
Sbjct: 575  MMLERNIRQNINFSTKCLQLLFDRGLQDKAFKITELIYKNGFCVKMDEVVQFLCNKRRAL 634

Query: 361  EAREMLLFCLENHQNVGVEMYNKVITGLCKTKRAAEAFSLYYELIE 498
            EA ++LLF L+N++N+ + + N VI  LCK  +A+EAFSL YEL++
Sbjct: 635  EACKLLLFSLKNNENIDIGLCNIVILDLCKLNKASEAFSLCYELVD 680