BLASTX nr result

ID: Coptis23_contig00038359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038359
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana]               55   8e-06

>gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana]
          Length = 238

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/71 (38%), Positives = 42/71 (59%)
 Frame = +3

Query: 3   GMGSSTVVQNIKDLVRQHQPDIICLSKTKVKKDMVSMLSKVLKYDHVFCVPVSGLHGGLA 182
           G+G    V+ +K++ R++ PD+ICLS+TK + D V      L + +   VP  GL GGL 
Sbjct: 63  GLGIDLTVRRLKEINRKYLPDVICLSETKQRNDYVRDTCCELGFSNFVMVPSMGLSGGLV 122

Query: 183 IL*KAGVNLEV 215
           +L K  V++ V
Sbjct: 123 VLWKPSVHISV 133


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