BLASTX nr result

ID: Coptis23_contig00038262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038262
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314703.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26
ref|XP_002312527.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26
ref|XP_002338760.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_002278244.1| PREDICTED: primary amine oxidase [Vitis vini...   120   1e-25
emb|CAN73878.1| hypothetical protein VITISV_029120 [Vitis vinifera]   120   1e-25

>ref|XP_002314703.1| predicted protein [Populus trichocarpa] gi|222863743|gb|EEF00874.1|
           predicted protein [Populus trichocarpa]
          Length = 673

 Score =  123 bits (308), Expect = 2e-26
 Identities = 52/82 (63%), Positives = 69/82 (84%)
 Frame = +3

Query: 3   GYGFPLFTFEEQIAANQLPLKYPPFIASVSKRKLNLTEVVCESFSVGWFGEKKKDKRELK 182
           GYG+PL TFEEQIAAN LPLKY PF+ S+ KR L + EVVC  F+VGW+GE+++ KR ++
Sbjct: 116 GYGYPLLTFEEQIAANALPLKYAPFLESIRKRGLKIEEVVCGGFTVGWYGEERRKKRIVR 175

Query: 183 ILCYYLNGTVNLYVRPLEGITV 248
           ++CYYL+GTVN Y+RP+EG+TV
Sbjct: 176 VMCYYLDGTVNAYMRPVEGVTV 197


>ref|XP_002312527.1| predicted protein [Populus trichocarpa] gi|222852347|gb|EEE89894.1|
           predicted protein [Populus trichocarpa]
          Length = 668

 Score =  120 bits (302), Expect = 9e-26
 Identities = 52/82 (63%), Positives = 68/82 (82%)
 Frame = +3

Query: 3   GYGFPLFTFEEQIAANQLPLKYPPFIASVSKRKLNLTEVVCESFSVGWFGEKKKDKRELK 182
           GYG+PL TFEEQ  AN LP KY PF+ S+ KR L + EVVC SF++GW+GEK+++KR ++
Sbjct: 113 GYGYPLLTFEEQGTANALPFKYTPFLESIRKRGLKVEEVVCTSFAIGWYGEKRRNKRVVR 172

Query: 183 ILCYYLNGTVNLYVRPLEGITV 248
           +LC YL+GTVNLY+RP+EGITV
Sbjct: 173 VLCNYLDGTVNLYMRPIEGITV 194


>ref|XP_002338760.1| predicted protein [Populus trichocarpa] gi|222873409|gb|EEF10540.1|
           predicted protein [Populus trichocarpa]
          Length = 147

 Score =  120 bits (301), Expect = 1e-25
 Identities = 52/82 (63%), Positives = 67/82 (81%)
 Frame = +3

Query: 3   GYGFPLFTFEEQIAANQLPLKYPPFIASVSKRKLNLTEVVCESFSVGWFGEKKKDKRELK 182
           GYG+PL TFEEQ  AN LP KY PF+ S+ KR L + EVVC SF++GW+GEK++ KR ++
Sbjct: 4   GYGYPLLTFEEQGTANALPFKYTPFLESIRKRGLKVEEVVCTSFAIGWYGEKRRSKRVVR 63

Query: 183 ILCYYLNGTVNLYVRPLEGITV 248
           +LC YL+GTVNLY+RP+EGITV
Sbjct: 64  VLCNYLDGTVNLYMRPIEGITV 85


>ref|XP_002278244.1| PREDICTED: primary amine oxidase [Vitis vinifera]
           gi|297737034|emb|CBI26235.3| unnamed protein product
           [Vitis vinifera]
          Length = 674

 Score =  120 bits (300), Expect = 1e-25
 Identities = 53/82 (64%), Positives = 70/82 (85%)
 Frame = +3

Query: 3   GYGFPLFTFEEQIAANQLPLKYPPFIASVSKRKLNLTEVVCESFSVGWFGEKKKDKRELK 182
           G+G+PL T EEQ AA++LPL YPPFIAS+ KRKL L++VVC +F+VGWFGE +K +R LK
Sbjct: 119 GHGYPLLTSEEQTAASELPLTYPPFIASIRKRKLKLSDVVCSTFTVGWFGE-EKSRRVLK 177

Query: 183 ILCYYLNGTVNLYVRPLEGITV 248
           ILC+Y +GT NLY+RP+EG+T+
Sbjct: 178 ILCFYTDGTANLYMRPIEGVTI 199


>emb|CAN73878.1| hypothetical protein VITISV_029120 [Vitis vinifera]
          Length = 644

 Score =  120 bits (300), Expect = 1e-25
 Identities = 53/82 (64%), Positives = 70/82 (85%)
 Frame = +3

Query: 3   GYGFPLFTFEEQIAANQLPLKYPPFIASVSKRKLNLTEVVCESFSVGWFGEKKKDKRELK 182
           G+G+PL T EEQ AA++LPL YPPFIAS+ KRKL L++VVC +F+VGWFGE +K +R LK
Sbjct: 119 GHGYPLLTSEEQTAASELPLTYPPFIASIRKRKLKLSDVVCSTFTVGWFGE-EKSRRVLK 177

Query: 183 ILCYYLNGTVNLYVRPLEGITV 248
           ILC+Y +GT NLY+RP+EG+T+
Sbjct: 178 ILCFYTDGTANLYMRPIEGVTI 199


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