BLASTX nr result

ID: Coptis23_contig00038258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038258
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41367.1| unknown [Lotus japonicus]                               80   7e-28
ref|XP_002532366.1| 1-aminocyclopropane-1-carboxylate oxidase, p...    81   9e-24
ref|XP_002264085.1| PREDICTED: hyoscyamine 6-dioxygenase [Vitis ...    74   1e-23
ref|XP_002306841.1| predicted protein [Populus trichocarpa] gi|2...    62   2e-19
gb|AFK41931.1| unknown [Medicago truncatula]                           67   6e-19

>gb|AFK41367.1| unknown [Lotus japonicus]
          Length = 241

 Score = 80.5 bits (197), Expect(2) = 7e-28
 Identities = 33/69 (47%), Positives = 45/69 (65%)
 Frame = -2

Query: 352 FEMPIEDRMPMFSEDPKQVSRFYSSIDYDNEETHYWRDILRHPCYPVESFKHLWPSKPAS 173
           FE+P E++  ++SEDP Q  R Y+SID+ NE+ HYWRD LRH  +P++     WP KP  
Sbjct: 8   FELPTEEKASLYSEDPIQSCRLYTSIDHANEDVHYWRDTLRHHSHPLQEHIQNWPHKPTR 67

Query: 172 YRKAAATYS 146
           YR    +YS
Sbjct: 68  YRDVMGSYS 76



 Score = 68.6 bits (166), Expect(2) = 7e-28
 Identities = 30/46 (65%), Positives = 37/46 (80%)
 Frame = -3

Query: 138 IRGLGLLLLEQIAEGLGVGSSYFEEELSKIQLLAINHYPPCPDPSL 1
           +R LGL+LL+ I  GLG+ S YF +ELS  Q++AINHYPPCPDPSL
Sbjct: 79  VRKLGLMLLDLICTGLGLDSGYFNDELSSGQMMAINHYPPCPDPSL 124


>ref|XP_002532366.1| 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus
           communis] gi|223527922|gb|EEF30009.1|
           1-aminocyclopropane-1-carboxylate oxidase, putative
           [Ricinus communis]
          Length = 333

 Score = 80.9 bits (198), Expect(2) = 9e-24
 Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
 Frame = -2

Query: 352 FEMPIEDRMPMFSEDPKQVSRFY-SSIDYDNEETHYWRDILRHPCYPVESFKHLWPSKPA 176
           FE+P ED+  ++SE+P +  R Y SS +Y NEE H+WRD LRHPC+PV++F   WP KP 
Sbjct: 84  FELPAEDKANLYSEEPSRSCRLYTSSPNYYNEEVHFWRDNLRHPCHPVDNFIDQWPEKPI 143

Query: 175 SYRKAAATYS 146
            YR+     S
Sbjct: 144 RYREVVGNCS 153



 Score = 54.3 bits (129), Expect(2) = 9e-24
 Identities = 23/46 (50%), Positives = 35/46 (76%)
 Frame = -3

Query: 138 IRGLGLLLLEQIAEGLGVGSSYFEEELSKIQLLAINHYPPCPDPSL 1
           +R L L +L+ I+ GL + + YF ++LSK  LL++NHYPPCP+P+L
Sbjct: 156 MRKLVLRILQMISHGLRLDAKYFGDDLSKELLLSVNHYPPCPEPNL 201


>ref|XP_002264085.1| PREDICTED: hyoscyamine 6-dioxygenase [Vitis vinifera]
           gi|297744130|emb|CBI37100.3| unnamed protein product
           [Vitis vinifera]
          Length = 341

 Score = 73.6 bits (179), Expect(2) = 1e-23
 Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = -2

Query: 352 FEMPIEDRMPMFSED-PKQVSRFYSSIDYDNEETHYWRDILRHPCYPVESFKHLWPSKPA 176
           F MP ED+  ++S D  K    + S+++YD EE H WRD LRHPC+P E +   WP KP 
Sbjct: 91  FNMPAEDKASLYSTDIDKSCILYTSNLNYDIEEVHLWRDNLRHPCHPSEEYVQFWPEKPT 150

Query: 175 SYRKAAATYS 146
            YR+    +S
Sbjct: 151 KYREIVGAFS 160



 Score = 61.2 bits (147), Expect(2) = 1e-23
 Identities = 28/46 (60%), Positives = 35/46 (76%)
 Frame = -3

Query: 138 IRGLGLLLLEQIAEGLGVGSSYFEEELSKIQLLAINHYPPCPDPSL 1
           +R L L +L+ I+EGLG+   YF  ELSK QLL++NHYP CPDPSL
Sbjct: 163 VRKLSLKILDLISEGLGLEQGYFGGELSKRQLLSVNHYPRCPDPSL 208


>ref|XP_002306841.1| predicted protein [Populus trichocarpa] gi|222856290|gb|EEE93837.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score = 62.0 bits (149), Expect(2) = 2e-19
 Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
 Frame = -2

Query: 352 FEMPIEDRMPMFSEDP---KQVSRFYSSIDYDNEETHYWRDILRHPCYPVESFKHLWPSK 182
           FE+P ED+   ++ED    K    + SS+ Y  E+ H WRD L+H C+P+E     WP K
Sbjct: 92  FELPAEDKAIFYTEDARSKKHCKLYPSSLIYATEDVHLWRDNLKHDCHPLEKCILDWPVK 151

Query: 181 PASYRKAAATYS 146
           P  YR+   +Y+
Sbjct: 152 PTRYRQVVGSYA 163



 Score = 58.2 bits (139), Expect(2) = 2e-19
 Identities = 24/39 (61%), Positives = 31/39 (79%)
 Frame = -3

Query: 117 LLEQIAEGLGVGSSYFEEELSKIQLLAINHYPPCPDPSL 1
           +LE I EGLG+ S YFE +L ++  L++NHYPPCPDPSL
Sbjct: 173 ILELICEGLGLESGYFEGKLGEVTSLSVNHYPPCPDPSL 211


>gb|AFK41931.1| unknown [Medicago truncatula]
          Length = 344

 Score = 67.4 bits (163), Expect(2) = 6e-19
 Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
 Frame = -2

Query: 352 FEMPIEDRMPMFSEDPKQVSRFYSS-IDYDNEETHYWRDILRHPCYPVESFKHLWPSKPA 176
           FE P E +  ++ E+  +  + +SS + Y+ ++ H WRD LRHP YP+E ++HLWP  P 
Sbjct: 90  FEKPNEYKHDLYPEEILKTCKMFSSTLKYECDKVHLWRDSLRHPAYPLEEWQHLWPEYPN 149

Query: 175 SYRKAAATYS 146
           +YR+    YS
Sbjct: 150 TYRECVGNYS 159



 Score = 51.6 bits (122), Expect(2) = 6e-19
 Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
 Frame = -3

Query: 138 IRGLGLLLLEQIAEGLGVGSSYFEEE-LSKIQLLAINHYPPCPDPSL 1
           I+ LG  ++  I+EGLG+   YF+ + LS   ++++NHYPPCPDPSL
Sbjct: 162 IKELGSRIMNLISEGLGLECGYFDNDNLSDSLVISLNHYPPCPDPSL 208


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