BLASTX nr result
ID: Coptis23_contig00038258
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00038258 (353 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK41367.1| unknown [Lotus japonicus] 80 7e-28 ref|XP_002532366.1| 1-aminocyclopropane-1-carboxylate oxidase, p... 81 9e-24 ref|XP_002264085.1| PREDICTED: hyoscyamine 6-dioxygenase [Vitis ... 74 1e-23 ref|XP_002306841.1| predicted protein [Populus trichocarpa] gi|2... 62 2e-19 gb|AFK41931.1| unknown [Medicago truncatula] 67 6e-19 >gb|AFK41367.1| unknown [Lotus japonicus] Length = 241 Score = 80.5 bits (197), Expect(2) = 7e-28 Identities = 33/69 (47%), Positives = 45/69 (65%) Frame = -2 Query: 352 FEMPIEDRMPMFSEDPKQVSRFYSSIDYDNEETHYWRDILRHPCYPVESFKHLWPSKPAS 173 FE+P E++ ++SEDP Q R Y+SID+ NE+ HYWRD LRH +P++ WP KP Sbjct: 8 FELPTEEKASLYSEDPIQSCRLYTSIDHANEDVHYWRDTLRHHSHPLQEHIQNWPHKPTR 67 Query: 172 YRKAAATYS 146 YR +YS Sbjct: 68 YRDVMGSYS 76 Score = 68.6 bits (166), Expect(2) = 7e-28 Identities = 30/46 (65%), Positives = 37/46 (80%) Frame = -3 Query: 138 IRGLGLLLLEQIAEGLGVGSSYFEEELSKIQLLAINHYPPCPDPSL 1 +R LGL+LL+ I GLG+ S YF +ELS Q++AINHYPPCPDPSL Sbjct: 79 VRKLGLMLLDLICTGLGLDSGYFNDELSSGQMMAINHYPPCPDPSL 124 >ref|XP_002532366.1| 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus communis] gi|223527922|gb|EEF30009.1| 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus communis] Length = 333 Score = 80.9 bits (198), Expect(2) = 9e-24 Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 1/70 (1%) Frame = -2 Query: 352 FEMPIEDRMPMFSEDPKQVSRFY-SSIDYDNEETHYWRDILRHPCYPVESFKHLWPSKPA 176 FE+P ED+ ++SE+P + R Y SS +Y NEE H+WRD LRHPC+PV++F WP KP Sbjct: 84 FELPAEDKANLYSEEPSRSCRLYTSSPNYYNEEVHFWRDNLRHPCHPVDNFIDQWPEKPI 143 Query: 175 SYRKAAATYS 146 YR+ S Sbjct: 144 RYREVVGNCS 153 Score = 54.3 bits (129), Expect(2) = 9e-24 Identities = 23/46 (50%), Positives = 35/46 (76%) Frame = -3 Query: 138 IRGLGLLLLEQIAEGLGVGSSYFEEELSKIQLLAINHYPPCPDPSL 1 +R L L +L+ I+ GL + + YF ++LSK LL++NHYPPCP+P+L Sbjct: 156 MRKLVLRILQMISHGLRLDAKYFGDDLSKELLLSVNHYPPCPEPNL 201 >ref|XP_002264085.1| PREDICTED: hyoscyamine 6-dioxygenase [Vitis vinifera] gi|297744130|emb|CBI37100.3| unnamed protein product [Vitis vinifera] Length = 341 Score = 73.6 bits (179), Expect(2) = 1e-23 Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 1/70 (1%) Frame = -2 Query: 352 FEMPIEDRMPMFSED-PKQVSRFYSSIDYDNEETHYWRDILRHPCYPVESFKHLWPSKPA 176 F MP ED+ ++S D K + S+++YD EE H WRD LRHPC+P E + WP KP Sbjct: 91 FNMPAEDKASLYSTDIDKSCILYTSNLNYDIEEVHLWRDNLRHPCHPSEEYVQFWPEKPT 150 Query: 175 SYRKAAATYS 146 YR+ +S Sbjct: 151 KYREIVGAFS 160 Score = 61.2 bits (147), Expect(2) = 1e-23 Identities = 28/46 (60%), Positives = 35/46 (76%) Frame = -3 Query: 138 IRGLGLLLLEQIAEGLGVGSSYFEEELSKIQLLAINHYPPCPDPSL 1 +R L L +L+ I+EGLG+ YF ELSK QLL++NHYP CPDPSL Sbjct: 163 VRKLSLKILDLISEGLGLEQGYFGGELSKRQLLSVNHYPRCPDPSL 208 >ref|XP_002306841.1| predicted protein [Populus trichocarpa] gi|222856290|gb|EEE93837.1| predicted protein [Populus trichocarpa] Length = 345 Score = 62.0 bits (149), Expect(2) = 2e-19 Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 3/72 (4%) Frame = -2 Query: 352 FEMPIEDRMPMFSEDP---KQVSRFYSSIDYDNEETHYWRDILRHPCYPVESFKHLWPSK 182 FE+P ED+ ++ED K + SS+ Y E+ H WRD L+H C+P+E WP K Sbjct: 92 FELPAEDKAIFYTEDARSKKHCKLYPSSLIYATEDVHLWRDNLKHDCHPLEKCILDWPVK 151 Query: 181 PASYRKAAATYS 146 P YR+ +Y+ Sbjct: 152 PTRYRQVVGSYA 163 Score = 58.2 bits (139), Expect(2) = 2e-19 Identities = 24/39 (61%), Positives = 31/39 (79%) Frame = -3 Query: 117 LLEQIAEGLGVGSSYFEEELSKIQLLAINHYPPCPDPSL 1 +LE I EGLG+ S YFE +L ++ L++NHYPPCPDPSL Sbjct: 173 ILELICEGLGLESGYFEGKLGEVTSLSVNHYPPCPDPSL 211 >gb|AFK41931.1| unknown [Medicago truncatula] Length = 344 Score = 67.4 bits (163), Expect(2) = 6e-19 Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 1/70 (1%) Frame = -2 Query: 352 FEMPIEDRMPMFSEDPKQVSRFYSS-IDYDNEETHYWRDILRHPCYPVESFKHLWPSKPA 176 FE P E + ++ E+ + + +SS + Y+ ++ H WRD LRHP YP+E ++HLWP P Sbjct: 90 FEKPNEYKHDLYPEEILKTCKMFSSTLKYECDKVHLWRDSLRHPAYPLEEWQHLWPEYPN 149 Query: 175 SYRKAAATYS 146 +YR+ YS Sbjct: 150 TYRECVGNYS 159 Score = 51.6 bits (122), Expect(2) = 6e-19 Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%) Frame = -3 Query: 138 IRGLGLLLLEQIAEGLGVGSSYFEEE-LSKIQLLAINHYPPCPDPSL 1 I+ LG ++ I+EGLG+ YF+ + LS ++++NHYPPCPDPSL Sbjct: 162 IKELGSRIMNLISEGLGLECGYFDNDNLSDSLVISLNHYPPCPDPSL 208