BLASTX nr result

ID: Coptis23_contig00038241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038241
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325581.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
ref|XP_003613275.1| hypothetical protein MTR_5g034810 [Medicago ...   114   3e-26
ref|XP_002516811.1| conserved hypothetical protein [Ricinus comm...   110   8e-26
gb|ABA29157.1| unknown [Pisum sativum]                                120   9e-26
gb|ABA29158.1| unknown [Pisum sativum]                                120   9e-26

>ref|XP_002325581.1| predicted protein [Populus trichocarpa] gi|222862456|gb|EEE99962.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score =  122 bits (307), Expect = 2e-26
 Identities = 48/77 (62%), Positives = 61/77 (79%)
 Frame = +1

Query: 166 YILDIVSEKIGTIVKCDSIEGGKLWEGMDMLVVNTWHWWHHTGDAQSWDFIEEGGKLYKD 345
           Y++D+V++K G ++K DSI  G  W GMDML+ NTWHWW HTG +Q WD+I+EGGKLYKD
Sbjct: 122 YLVDLVNDKAGRVLKLDSINNGNAWLGMDMLIFNTWHWWTHTGRSQPWDYIQEGGKLYKD 181

Query: 346 KDRLVAFQKGLTTWGNW 396
            +RL+AF KGLTTW  W
Sbjct: 182 MNRLIAFYKGLTTWARW 198


>ref|XP_003613275.1| hypothetical protein MTR_5g034810 [Medicago truncatula]
           gi|355514610|gb|AES96233.1| hypothetical protein
           MTR_5g034810 [Medicago truncatula]
          Length = 355

 Score =  114 bits (284), Expect(2) = 3e-26
 Identities = 43/77 (55%), Positives = 61/77 (79%)
 Frame = +1

Query: 166 YILDIVSEKIGTIVKCDSIEGGKLWEGMDMLVVNTWHWWHHTGDAQSWDFIEEGGKLYKD 345
           +++DIV+E+IG ++K DSIEGG+LW+G D+L+ N+WHWW HTG  Q WDF++EG  +YKD
Sbjct: 157 FLVDIVTERIGQVLKLDSIEGGRLWKGNDILIFNSWHWWPHTGKKQIWDFVQEGKHIYKD 216

Query: 346 KDRLVAFQKGLTTWGNW 396
            +RLV ++K L TW  W
Sbjct: 217 MNRLVMYKKALKTWAKW 233



 Score = 29.6 bits (65), Expect(2) = 3e-26
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +2

Query: 92  NIVNDGRVSSFIFQEYNVSLMFNRNTFWI 178
           ++ N G +S+F F  Y+V LMF+RN F +
Sbjct: 132 SVTNKG-LSTFTFPSYDVKLMFSRNAFLV 159


>ref|XP_002516811.1| conserved hypothetical protein [Ricinus communis]
           gi|223543899|gb|EEF45425.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 360

 Score =  110 bits (274), Expect(2) = 8e-26
 Identities = 44/76 (57%), Positives = 57/76 (75%)
 Frame = +1

Query: 169 ILDIVSEKIGTIVKCDSIEGGKLWEGMDMLVVNTWHWWHHTGDAQSWDFIEEGGKLYKDK 348
           ++D V EKIG ++K DSI  G+LW+ +D L+ N+WHWW HTG  Q WDFI+EG K+YKD 
Sbjct: 159 LVDTVEEKIGRVLKLDSISNGELWKRVDTLIFNSWHWWLHTGRKQPWDFIQEGEKIYKDI 218

Query: 349 DRLVAFQKGLTTWGNW 396
           DRLVA++K L TW  W
Sbjct: 219 DRLVAYEKALRTWARW 234



 Score = 32.0 bits (71), Expect(2) = 8e-26
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = +2

Query: 68  LHTTI*RSNIVND--GRVSSFIFQEYNVSLMFNRNTFWI 178
           LHT +  +    D  G +S+F F EYNVSLM +RN   +
Sbjct: 122 LHTALPEAKYTLDRVGGLSTFRFTEYNVSLMLSRNALLV 160


>gb|ABA29157.1| unknown [Pisum sativum]
          Length = 371

 Score =  120 bits (302), Expect = 9e-26
 Identities = 46/77 (59%), Positives = 60/77 (77%)
 Frame = +1

Query: 166 YILDIVSEKIGTIVKCDSIEGGKLWEGMDMLVVNTWHWWHHTGDAQSWDFIEEGGKLYKD 345
           Y++D+  E +G ++K DSI+ G  W GMD+L+ NTWHWW HTG+AQ WD+I+EGGKLYKD
Sbjct: 177 YLVDLDRENVGNVLKLDSIKSGDAWRGMDVLIFNTWHWWTHTGNAQPWDYIQEGGKLYKD 236

Query: 346 KDRLVAFQKGLTTWGNW 396
            +R +AF KGLTTW  W
Sbjct: 237 MNRFIAFYKGLTTWARW 253


>gb|ABA29158.1| unknown [Pisum sativum]
          Length = 371

 Score =  120 bits (302), Expect = 9e-26
 Identities = 46/77 (59%), Positives = 60/77 (77%)
 Frame = +1

Query: 166 YILDIVSEKIGTIVKCDSIEGGKLWEGMDMLVVNTWHWWHHTGDAQSWDFIEEGGKLYKD 345
           Y++D+  E +G ++K DSI+ G  W GMD+L+ NTWHWW HTG+AQ WD+I+EGGKLYKD
Sbjct: 177 YLVDLDRENVGNVLKLDSIKSGDAWRGMDVLIFNTWHWWTHTGNAQPWDYIQEGGKLYKD 236

Query: 346 KDRLVAFQKGLTTWGNW 396
            +R +AF KGLTTW  W
Sbjct: 237 MNRFIAFYKGLTTWARW 253


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