BLASTX nr result

ID: Coptis23_contig00038236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038236
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABV49061.1| sucrose non-fermenting-1-related protein kinase 1...    44   6e-08
gb|AFN89137.1| sucrose non-fermenting 1 [Mesembryanthemum crysta...    46   7e-08
ref|XP_004145003.1| PREDICTED: SNF1-related protein kinase catal...    43   1e-07
emb|CAA71142.1| SNF1-related protein kinase [Cucumis sativus]          43   1e-07
ref|XP_002882201.1| hypothetical protein ARALYDRAFT_317081 [Arab...    43   2e-07

>gb|ABV49061.1| sucrose non-fermenting-1-related protein kinase 1 [Malus
           hupehensis]
          Length = 515

 Score = 43.9 bits (102), Expect(2) = 6e-08
 Identities = 23/47 (48%), Positives = 31/47 (65%)
 Frame = -2

Query: 243 WVDHQEISL*PQLTVERKWALVRQYRAILCEKVTEVLKAWQDLKAGW 103
           ++++Q +   PQ  VERKWAL  Q RA   E +TEVLKA Q+L+  W
Sbjct: 374 YMEYQGMGFRPQFPVERKWALGLQSRAHPREIMTEVLKALQELQVCW 420



 Score = 37.7 bits (86), Expect(2) = 6e-08
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
 Frame = -3

Query: 101 RIGHYKMQCR*FPC---FNEGMLNSFVHGNRYIG 9
           +IGHY M+CR  P     NEGM+++ VH N Y G
Sbjct: 422 KIGHYNMKCRWVPGTPGHNEGMIDNSVHSNNYFG 455


>gb|AFN89137.1| sucrose non-fermenting 1 [Mesembryanthemum crystallinum]
          Length = 510

 Score = 45.8 bits (107), Expect(2) = 7e-08
 Identities = 25/46 (54%), Positives = 29/46 (63%)
 Frame = -2

Query: 240 VDHQEISL*PQLTVERKWALVRQYRAILCEKVTEVLKAWQDLKAGW 103
           VD+Q + L  Q  VERKWAL  Q RA   E +TEVLKA Q+L   W
Sbjct: 370 VDYQGVGLRSQFPVERKWALGLQSRAHPREIMTEVLKALQELNVSW 415



 Score = 35.4 bits (80), Expect(2) = 7e-08
 Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
 Frame = -3

Query: 101 RIGHYKMQCR*FPCF---NEGMLNSFVHGNRYIG 9
           +IGHY M+CR  P     +EGM+N+ VH + Y G
Sbjct: 417 KIGHYNMKCRWIPGIPGHHEGMVNNPVHNDHYFG 450


>ref|XP_004145003.1| PREDICTED: SNF1-related protein kinase catalytic subunit alpha
           KIN10-like [Cucumis sativus]
           gi|449474166|ref|XP_004154092.1| PREDICTED: SNF1-related
           protein kinase catalytic subunit alpha KIN10-like
           [Cucumis sativus] gi|449498915|ref|XP_004160670.1|
           PREDICTED: SNF1-related protein kinase catalytic subunit
           alpha KIN10-like [Cucumis sativus]
          Length = 515

 Score = 43.1 bits (100), Expect(2) = 1e-07
 Identities = 23/47 (48%), Positives = 30/47 (63%)
 Frame = -2

Query: 243 WVDHQEISL*PQLTVERKWALVRQYRAILCEKVTEVLKAWQDLKAGW 103
           ++D+Q + L  Q  VERKWAL  Q RA   E +TEVLKA ++L   W
Sbjct: 374 YMDYQGMGLRAQFPVERKWALGLQSRAHPREIMTEVLKALRELNVAW 420



 Score = 37.7 bits (86), Expect(2) = 1e-07
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
 Frame = -3

Query: 101 RIGHYKMQCR*FPCF---NEGMLNSFVHGNRYIG 9
           +IGHY M+CR  P     +EGM+N+ VH N Y G
Sbjct: 422 KIGHYNMKCRWLPGIPGHHEGMINNPVHSNHYFG 455


>emb|CAA71142.1| SNF1-related protein kinase [Cucumis sativus]
          Length = 504

 Score = 43.1 bits (100), Expect(2) = 1e-07
 Identities = 23/47 (48%), Positives = 30/47 (63%)
 Frame = -2

Query: 243 WVDHQEISL*PQLTVERKWALVRQYRAILCEKVTEVLKAWQDLKAGW 103
           ++D+Q + L  Q  VERKWAL  Q RA   E +TEVLKA ++L   W
Sbjct: 363 YMDYQGMGLRAQFPVERKWALGLQSRAHPREIMTEVLKALRELNVAW 409



 Score = 37.7 bits (86), Expect(2) = 1e-07
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
 Frame = -3

Query: 101 RIGHYKMQCR*FPCF---NEGMLNSFVHGNRYIG 9
           +IGHY M+CR  P     +EGM+N+ VH N Y G
Sbjct: 411 KIGHYNMKCRWLPGIPGHHEGMINNPVHSNHYFG 444


>ref|XP_002882201.1| hypothetical protein ARALYDRAFT_317081 [Arabidopsis lyrata subsp.
           lyrata] gi|297328041|gb|EFH58460.1| hypothetical protein
           ARALYDRAFT_317081 [Arabidopsis lyrata subsp. lyrata]
          Length = 509

 Score = 43.1 bits (100), Expect(2) = 2e-07
 Identities = 24/46 (52%), Positives = 29/46 (63%)
 Frame = -2

Query: 240 VDHQEISL*PQLTVERKWALVRQYRAILCEKVTEVLKAWQDLKAGW 103
           +++Q + L  Q  VERKWAL  Q RA   E +TEVLKA QDL   W
Sbjct: 372 MEYQGVGLRSQYPVERKWALGLQSRAHPREIMTEVLKALQDLNVCW 417



 Score = 36.6 bits (83), Expect(2) = 2e-07
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = -3

Query: 101 RIGHYKMQCR*FPCFNEGMLNSFVHGNRYIG 9
           +IGHY M+CR  P   +GML++ +H + Y G
Sbjct: 419 KIGHYNMKCRWVPNSTDGMLSNSMHDSNYFG 449


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