BLASTX nr result

ID: Coptis23_contig00038229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038229
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534087.1| zinc finger protein, putative [Ricinus commu...   120   1e-25
ref|XP_002273296.1| PREDICTED: zinc finger protein 2-like [Vitis...   114   1e-23
ref|XP_002329648.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-20
emb|CAN80869.1| hypothetical protein VITISV_038605 [Vitis vinifera]    97   1e-18
ref|XP_003543747.1| PREDICTED: zinc finger protein 2-like [Glyci...    92   3e-17

>ref|XP_002534087.1| zinc finger protein, putative [Ricinus communis]
           gi|223525873|gb|EEF28297.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 155

 Score =  120 bits (301), Expect = 1e-25
 Identities = 65/118 (55%), Positives = 78/118 (66%), Gaps = 1/118 (0%)
 Frame = -3

Query: 438 RVFSCNYCQRKFHSSQALGGHQNAHKLERTLAKRNRELSSALRPHGGSNNHRSRSSTDDV 259
           RVFSCNYCQRKF+SSQALGGHQNAHKLERTLAK++RELSSA+R HGG    +S SS+   
Sbjct: 45  RVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELSSAVRAHGG----KSGSSSTSG 100

Query: 258 SNHSEQVQPPI-YHRHAGHFGSEVNYGRREMSYGLGERENLWGTNYRSDNVNKEDFNQ 88
            NH  + QP   +H H G F  +++YGRR+           W   YR +NV  E  NQ
Sbjct: 101 LNHVRRNQPGFEHHGHGGRFIDDMSYGRRDS----------WSMGYRPENVQDEFNNQ 148


>ref|XP_002273296.1| PREDICTED: zinc finger protein 2-like [Vitis vinifera]
          Length = 154

 Score =  114 bits (284), Expect = 1e-23
 Identities = 57/93 (61%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
 Frame = -3

Query: 438 RVFSCNYCQRKFHSSQALGGHQNAHKLERTLAKRNRELSSALRPHGGSNNHRSRSSTDDV 259
           RVFSCNYCQRKF+SSQALGGHQNAHKLERTLAK++RELSSA+RPHGG N   + S T   
Sbjct: 42  RVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELSSAVRPHGGPNQRSNASGTGLF 101

Query: 258 SNHSEQVQPPIYHRHAGHFGSEVNYGRR-EMSY 163
               + V    +  HAG F ++++YG R EM+Y
Sbjct: 102 RRTQQPVVGFEHQGHAGRFQNDMSYGARIEMNY 134


>ref|XP_002329648.1| predicted protein [Populus trichocarpa] gi|222870529|gb|EEF07660.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score =  102 bits (255), Expect = 2e-20
 Identities = 58/113 (51%), Positives = 71/113 (62%)
 Frame = -3

Query: 438 RVFSCNYCQRKFHSSQALGGHQNAHKLERTLAKRNRELSSALRPHGGSNNHRSRSSTDDV 259
           R+FSCNYCQRKF+SSQALGGHQNAHKLERTLAK++RE+SS++R HGGSN           
Sbjct: 39  RIFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREMSSSVRAHGGSN----------- 87

Query: 258 SNHSEQVQPPIYHRHAGHFGSEVNYGRREMSYGLGERENLWGTNYRSDNVNKE 100
                    P Y R      +E+NYG RE   G+G     W   YR++NV +E
Sbjct: 88  ---------PRYGR------TEMNYGSRE---GIG---GSWSMVYRTENVQEE 119


>emb|CAN80869.1| hypothetical protein VITISV_038605 [Vitis vinifera]
          Length = 198

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 57/125 (45%), Positives = 69/125 (55%), Gaps = 33/125 (26%)
 Frame = -3

Query: 438 RVFSCNYCQRKFHSSQALGGHQNA--------------------------------HKLE 355
           RVFSCNYCQRKF+SSQALGGHQNA                                HKLE
Sbjct: 54  RVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELSSARKFYSSQALGGHQNAHKLE 113

Query: 354 RTLAKRNRELSSALRPHGGSNNHRSRSSTDDVSNHSEQVQPPIYHRHAGHFGSEVNYGRR 175
           RTLAK++RELSSA+RPHGG N   + S T       + V    +  HAG F ++++YG R
Sbjct: 114 RTLAKKSRELSSAVRPHGGPNQRSNASGTGLFRRTQQPVVGFEHQGHAGRFQNDMSYGAR 173

Query: 174 -EMSY 163
            EM+Y
Sbjct: 174 IEMNY 178


>ref|XP_003543747.1| PREDICTED: zinc finger protein 2-like [Glycine max]
          Length = 164

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 58/125 (46%), Positives = 77/125 (61%), Gaps = 8/125 (6%)
 Frame = -3

Query: 438 RVFSCNYCQRKFHSSQALGGHQNAHKLERTLAKRNRELSSALRPHG--------GSNNHR 283
           R+FSCNYCQRKF+SSQALGGHQNAHKLERTLAK++RELSS ++ +G        G+++H 
Sbjct: 46  RIFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELSSNMQSYGSPEQRSNFGASHHL 105

Query: 282 SRSSTDDVSNHSEQVQPPIYHRHAGHFGSEVNYGRREMSYGLGERENLWGTNYRSDNVNK 103
            R +   V N  +      Y R  G    E +YG +E   G+G   + W   Y S++V +
Sbjct: 106 GR-ALGVVDNQGQS-----YARLGGR--KEFSYGSKE---GVGVASS-WSRGYTSEHV-Q 152

Query: 102 EDFNQ 88
           ED  Q
Sbjct: 153 EDMGQ 157


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