BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038225
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|2...   168   4e-40
ref|XP_002528143.1| pentatricopeptide repeat-containing protein,...   167   6e-40
ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containi...   167   8e-40
emb|CBI27232.3| unnamed protein product [Vitis vinifera]              167   8e-40
ref|XP_002297917.1| predicted protein [Populus trichocarpa] gi|2...   164   5e-39

>ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|222842032|gb|EEE79579.1|
           predicted protein [Populus trichocarpa]
          Length = 641

 Score =  168 bits (426), Expect = 4e-40
 Identities = 82/119 (68%), Positives = 98/119 (82%)
 Frame = -1

Query: 473 VTYNILLEGLCKLNNISQAMDLLNSMLDRGCDPDLITCNIFLMILRENQNPPQDGRDFLD 294
           VTYNILL  LCK ++IS+A+DLLNSMLDRGCDPDL+TC IFL  LRE  +PPQDGR+FLD
Sbjct: 522 VTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFLD 581

Query: 293 GLVLQLVKRRRIFAASKIVEVMLQKYFSPKASTWGRVVKDLCRHRKVQAGIELCRSKLF 117
           GLV++L+KR+R+  ASKIVEVMLQK   PK STW RVV+DLC  +KVQA I+ C S L+
Sbjct: 582 GLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAAIQKCWSILY 640


>ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532441|gb|EEF34234.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 653

 Score =  167 bits (424), Expect = 6e-40
 Identities = 80/119 (67%), Positives = 99/119 (83%)
 Frame = -1

Query: 473 VTYNILLEGLCKLNNISQAMDLLNSMLDRGCDPDLITCNIFLMILRENQNPPQDGRDFLD 294
           +TYNIL   LCK ++IS+A+DLLNSMLDRGCDPDL+TCNIFL +LRE  +PPQDG  FLD
Sbjct: 534 ITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQDGAKFLD 593

Query: 293 GLVLQLVKRRRIFAASKIVEVMLQKYFSPKASTWGRVVKDLCRHRKVQAGIELCRSKLF 117
            LV++L+KR+R   ASKIVEVMLQK+ SPKASTW RVV +LC+ +K+QA I+ C SKL+
Sbjct: 594 ELVVRLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELCQPKKIQAVIDKCWSKLY 652


>ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  167 bits (423), Expect = 8e-40
 Identities = 81/119 (68%), Positives = 97/119 (81%)
 Frame = -1

Query: 473 VTYNILLEGLCKLNNISQAMDLLNSMLDRGCDPDLITCNIFLMILRENQNPPQDGRDFLD 294
           VTYNILL  LCK N+IS A+DLLNSMLDRGC+PDLITCNIFL  LRE  NPPQDGR+FLD
Sbjct: 525 VTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLD 584

Query: 293 GLVLQLVKRRRIFAASKIVEVMLQKYFSPKASTWGRVVKDLCRHRKVQAGIELCRSKLF 117
            LV++L KR+RI  A+KI+EVMLQK+  P ASTW R++ +LC+ +KVQA I+ C S LF
Sbjct: 585 ELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAIIDKCWSSLF 643


>emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  167 bits (423), Expect = 8e-40
 Identities = 81/119 (68%), Positives = 97/119 (81%)
 Frame = -1

Query: 473 VTYNILLEGLCKLNNISQAMDLLNSMLDRGCDPDLITCNIFLMILRENQNPPQDGRDFLD 294
           VTYNILL  LCK N+IS A+DLLNSMLDRGC+PDLITCNIFL  LRE  NPPQDGR+FLD
Sbjct: 541 VTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLD 600

Query: 293 GLVLQLVKRRRIFAASKIVEVMLQKYFSPKASTWGRVVKDLCRHRKVQAGIELCRSKLF 117
            LV++L KR+RI  A+KI+EVMLQK+  P ASTW R++ +LC+ +KVQA I+ C S LF
Sbjct: 601 ELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAIIDKCWSSLF 659


>ref|XP_002297917.1| predicted protein [Populus trichocarpa] gi|222845175|gb|EEE82722.1|
           predicted protein [Populus trichocarpa]
          Length = 670

 Score =  164 bits (416), Expect = 5e-39
 Identities = 80/119 (67%), Positives = 99/119 (83%)
 Frame = -1

Query: 473 VTYNILLEGLCKLNNISQAMDLLNSMLDRGCDPDLITCNIFLMILRENQNPPQDGRDFLD 294
           VTYNILL  LCK ++IS+A+DLLNSMLDRGCDPDL+TC IFL +LRE  +PPQDGR+FLD
Sbjct: 552 VTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQDGREFLD 611

Query: 293 GLVLQLVKRRRIFAASKIVEVMLQKYFSPKASTWGRVVKDLCRHRKVQAGIELCRSKLF 117
            LV++L+KR+R+  ASKIVEVMLQK   PK STW RVV++LC+ +KVQA I+ C S L+
Sbjct: 612 ELVVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCKPKKVQAVIQKCWSILY 670