BLASTX nr result

ID: Coptis23_contig00038222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038222
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523137.1| PREDICTED: 4-coumarate--CoA ligase-like 9-li...   179   4e-43
ref|XP_003528115.1| PREDICTED: 4-coumarate--CoA ligase-like 9-li...   177   1e-42
ref|XP_002279522.2| PREDICTED: 4-coumarate--CoA ligase-like 9-li...   176   2e-42
emb|CAN75661.1| hypothetical protein VITISV_007923 [Vitis vinifera]   176   2e-42
ref|XP_002318708.1| acyl:coa ligase [Populus trichocarpa] gi|222...   170   2e-40

>ref|XP_003523137.1| PREDICTED: 4-coumarate--CoA ligase-like 9-like [Glycine max]
          Length = 580

 Score =  179 bits (453), Expect = 4e-43
 Identities = 103/189 (54%), Positives = 129/189 (68%), Gaps = 4/189 (2%)
 Frame = -2

Query: 568 TILLDSTHFYSML----TIPVTGKLNQVEVPVQQNDTAVILYSSVTTGLVKGVELTHRTF 401
           TILLDS  F SML    T+    + ++VE  V Q+D+A IL+SS TTG VKGV LTHR F
Sbjct: 189 TILLDSPFFLSMLDDDETVNRDSRAHRVE-EVSQSDSAAILFSSGTTGRVKGVLLTHRNF 247

Query: 400 IAFLAGEHATIQAKPVADHALQEVGLLTVPLFHTYGFFMCVRAIALGETSVYMQRFDFEG 221
           I  + G +     + VAD     V L T+PLFH +GFFM VRAIA+GET V+MQRFDFEG
Sbjct: 248 ITLIGGFY---HLRNVADGDPHPVSLFTLPLFHVFGFFMLVRAIAVGETLVFMQRFDFEG 304

Query: 220 MLKALEAHCVTYMTASPTIMVALTKLAVVEKYDLSSLLMVQRGGAPLGKEAAVKFVARFP 41
           MLKA+E + +TYM  SP ++VAL K  +V+KYDLSSL  +  GGAPLGKE A  F  +FP
Sbjct: 305 MLKAVERYGITYMPVSPPLVVALAKSELVKKYDLSSLRYLGCGGAPLGKEVADDFRGKFP 364

Query: 40  HVQLLPGKG 14
           +V++  G G
Sbjct: 365 NVEIGQGYG 373


>ref|XP_003528115.1| PREDICTED: 4-coumarate--CoA ligase-like 9-like [Glycine max]
          Length = 597

 Score =  177 bits (448), Expect = 1e-42
 Identities = 101/189 (53%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
 Frame = -2

Query: 568 TILLDSTHFYSMLT----IPVTGKLNQVEVPVQQNDTAVILYSSVTTGLVKGVELTHRTF 401
           TILLDS  F SML     +    +  +VEV   Q+D+A IL+SS TTG VKGV LTHR F
Sbjct: 207 TILLDSPLFLSMLNNNEYVNADSRTRRVEV--SQSDSAAILFSSGTTGRVKGVLLTHRNF 264

Query: 400 IAFLAGEHATIQAKPVADHALQEVGLLTVPLFHTYGFFMCVRAIALGETSVYMQRFDFEG 221
           IA + G +     + V D     V L T+PLFH +GFFM VRAIA+GET V+M RFDFEG
Sbjct: 265 IALIGGFY---HLRMVVDDDPHPVSLFTLPLFHVFGFFMLVRAIAVGETLVFMHRFDFEG 321

Query: 220 MLKALEAHCVTYMTASPTIMVALTKLAVVEKYDLSSLLMVQRGGAPLGKEAAVKFVARFP 41
           MLKA+E + +TYM  SP ++VAL K  +V+KYD+SSL  +  GGAPLGKE A  F A+FP
Sbjct: 322 MLKAVERYRITYMPVSPPLVVALAKSELVKKYDMSSLRYLGSGGAPLGKEVAEDFRAQFP 381

Query: 40  HVQLLPGKG 14
           +V++  G G
Sbjct: 382 NVEIGQGYG 390


>ref|XP_002279522.2| PREDICTED: 4-coumarate--CoA ligase-like 9-like [Vitis vinifera]
          Length = 851

 Score =  176 bits (447), Expect = 2e-42
 Identities = 99/185 (53%), Positives = 124/185 (67%)
 Frame = -2

Query: 568 TILLDSTHFYSMLTIPVTGKLNQVEVPVQQNDTAVILYSSVTTGLVKGVELTHRTFIAFL 389
           T+L+DS  F SM+T    G   +VEV   Q+D A ILYSS TTG VKGV LTHR  I  +
Sbjct: 165 TVLVDSLEFDSMMTENGAGYGKRVEV--SQSDPAAILYSSGTTGRVKGVLLTHRNLITLI 222

Query: 388 AGEHATIQAKPVADHALQEVGLLTVPLFHTYGFFMCVRAIALGETSVYMQRFDFEGMLKA 209
           AG H     K   +   + V L T+PLFH +GFFM VRA++L ET V M+RFDFE MLKA
Sbjct: 223 AGFHHNRLEKE--EDGPRPVSLFTLPLFHVFGFFMLVRAVSLAETLVLMERFDFENMLKA 280

Query: 208 LEAHCVTYMTASPTIMVALTKLAVVEKYDLSSLLMVQRGGAPLGKEAAVKFVARFPHVQL 29
           +E + +TYM  SP ++VAL K   V KYDLSSL ++  GGAPLGKE + +F ARFP+VQ+
Sbjct: 281 VEKYRITYMPVSPPLVVALAKSEFVGKYDLSSLQLLGSGGAPLGKEVSERFSARFPNVQM 340

Query: 28  LPGKG 14
           + G G
Sbjct: 341 VQGYG 345


>emb|CAN75661.1| hypothetical protein VITISV_007923 [Vitis vinifera]
          Length = 562

 Score =  176 bits (447), Expect = 2e-42
 Identities = 99/185 (53%), Positives = 124/185 (67%)
 Frame = -2

Query: 568 TILLDSTHFYSMLTIPVTGKLNQVEVPVQQNDTAVILYSSVTTGLVKGVELTHRTFIAFL 389
           T+L+DS  F SM+T    G   +VEV   Q+D A ILYSS TTG VKGV LTHR  I  +
Sbjct: 165 TVLVDSLEFDSMMTENGAGYGKRVEV--SQSDPAAILYSSGTTGRVKGVLLTHRNLITLI 222

Query: 388 AGEHATIQAKPVADHALQEVGLLTVPLFHTYGFFMCVRAIALGETSVYMQRFDFEGMLKA 209
           AG H     K   +   + V L T+PLFH +GFFM VRA++L ET V M+RFDFE MLKA
Sbjct: 223 AGFHHNRLEKE--EDGPRPVSLFTLPLFHVFGFFMLVRAVSLAETLVLMERFDFENMLKA 280

Query: 208 LEAHCVTYMTASPTIMVALTKLAVVEKYDLSSLLMVQRGGAPLGKEAAVKFVARFPHVQL 29
           +E + +TYM  SP ++VAL K   V KYDLSSL ++  GGAPLGKE + +F ARFP+VQ+
Sbjct: 281 VEKYRITYMPVSPPLVVALAKSEFVGKYDLSSLQLLGSGGAPLGKEVSERFSARFPNVQM 340

Query: 28  LPGKG 14
           + G G
Sbjct: 341 VQGYG 345


>ref|XP_002318708.1| acyl:coa ligase [Populus trichocarpa] gi|222859381|gb|EEE96928.1|
           acyl:coa ligase [Populus trichocarpa]
          Length = 550

 Score =  170 bits (430), Expect = 2e-40
 Identities = 94/185 (50%), Positives = 117/185 (63%)
 Frame = -2

Query: 568 TILLDSTHFYSMLTIPVTGKLNQVEVPVQQNDTAVILYSSVTTGLVKGVELTHRTFIAFL 389
           TIL+DS  F S+LT P   +  Q  V V Q+D A ILYSS TTG VKGV LTHR  IA +
Sbjct: 160 TILIDSPEFTSLLTQPKP-QAKQPRVEVSQSDIAAILYSSGTTGRVKGVALTHRNLIALI 218

Query: 388 AGEHATIQAKPVADHALQEVGLLTVPLFHTYGFFMCVRAIALGETSVYMQRFDFEGMLKA 209
           +G H  ++           V L  +PLFH +GFFM + A + GET V M+RFDF  MLK 
Sbjct: 219 SGFHHNMKEPEPNQPEQPPVSLFILPLFHVFGFFMSINAFSRGETLVLMERFDFVQMLKH 278

Query: 208 LEAHCVTYMTASPTIMVALTKLAVVEKYDLSSLLMVQRGGAPLGKEAAVKFVARFPHVQL 29
           +E + VTYM  SP ++VA  K  + EKYDLSSL  +  GGAPLGKE A KF  +FPHV++
Sbjct: 279 VEKYRVTYMPVSPPLIVAFVKSDLTEKYDLSSLRSLGCGGAPLGKEVADKFKEKFPHVEI 338

Query: 28  LPGKG 14
           + G G
Sbjct: 339 VQGYG 343


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